Multiple platform build/check report for BioC 3.17 - INSTALL results for Maaslin2 on nebbiolo1

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This page was generated on 2023-04-12 10:55:26 -0400 (Wed, 12 Apr 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 22.04.1 LTS)	x86_64	4.3.0 alpha (2023-04-03 r84154)	4547
nebbiolo2	Linux (Ubuntu 20.04.5 LTS)	x86_64	R Under development (unstable) (2023-02-14 r83833) -- "Unsuffered Consequences"	4333
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

INSTALL results for Maaslin2 on nebbiolo1

To the developers/maintainers of the Maaslin2 package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Maaslin2.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Maaslin2 1.13.0 (landing page)
Lauren McIver

Snapshot Date: 2023-04-11 14:00:16 -0400 (Tue, 11 Apr 2023)

git_url: https://git.bioconductor.org/packages/Maaslin2

git_branch: devel

git_last_commit: 56c7729

git_last_commit_date: 2022-11-01 11:20:14 -0400 (Tue, 01 Nov 2022)

nebbiolo1

Linux (Ubuntu 22.04.1 LTS) / x86_64

ERROR

skipped

nebbiolo2

Linux (Ubuntu 20.04.5 LTS) / x86_64

Summary

Package: Maaslin2

Version: 1.13.0

Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL Maaslin2

StartedAt: 2023-04-11 15:28:48 -0400 (Tue, 11 Apr 2023)

EndedAt: 2023-04-11 15:28:48 -0400 (Tue, 11 Apr 2023)

EllapsedTime: 0.5 seconds

RetCode: 1

Status: ERROR

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL Maaslin2
###
##############################################################################
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* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/site-library’
ERROR: dependency ‘cplm’ is not available for package ‘Maaslin2’
* removing ‘/home/biocbuild/bbs-3.17-bioc/R/site-library/Maaslin2’