##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:BiocHubsShiny.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings BiocHubsShiny_0.99.13.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/BiocHubsShiny.Rcheck’
* using R Under development (unstable) (2023-02-14 r83833)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
    gcc (Ubuntu 9.4.0-1ubuntu1~20.04.1) 9.4.0
    GNU Fortran (Ubuntu 9.4.0-1ubuntu1~20.04.1) 9.4.0
* running under: Ubuntu 20.04.6 LTS
* using session charset: UTF-8
* checking for file ‘BiocHubsShiny/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘BiocHubsShiny’ version ‘0.99.13’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘BiocHubsShiny’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
  ‘BiocHubsShiny.Rmd’ using ‘UTF-8’... OK
 NONE
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: OK

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL BiocHubsShiny
###
##############################################################################
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* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/site-library’
* installing *source* package ‘BiocHubsShiny’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BiocHubsShiny)

R Under development (unstable) (2023-02-14 r83833) -- "Unsuffered Consequences"
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> shinytest2::test_app()
Loading required package: testthat
Loading required package: shiny
✔ | F W S  OK | Context

⠏ |         0 | server                                                          
⠋ |         1 | server                                                          
⠙ |         2 | server                                                          
✔ |         2 | server [15.3s]

⠏ |         0 | shinytest2                                                      Error in initialize(...) : Invalid path to Chrome

⠋ |     1   0 | shinytest2                                                      Error in initialize(...) : Invalid path to Chrome
Error in initialize(...) : Invalid path to Chrome

✔ |     3   0 | shinytest2 [0.2s]
────────────────────────────────────────────────────────────────────────────────
Skip ('test-shinytest2.R:6:5'): {shinytest2} recording: BiocHubsShiny-EH
Reason: `shinytest2::AppDriver` can not be initialized as {chromote} can not be started

Skip ('test-shinytest2.R:19:5'): {shinytest2} recording: BiocHubsShiny-about
Reason: `shinytest2::AppDriver` can not be initialized as {chromote} can not be started

Skip ('test-shinytest2.R:31:5'): {shinytest2} recording: BiocHubsShiny-selection
Reason: `shinytest2::AppDriver` can not be initialized as {chromote} can not be started
────────────────────────────────────────────────────────────────────────────────

══ Results ═════════════════════════════════════════════════════════════════════
Duration: 15.6 s

── Skipped tests  ──────────────────────────────────────────────────────────────
• `shinytest2::AppDriver` can not be initialized as {chromote} can not be started (3)

[ FAIL 0 | WARN 0 | SKIP 3 | PASS 2 ]
Deleting unused snapshots:
• linux-4.3/shinytest2/BiocHubsShiny-EH-001.png
• linux-4.3/shinytest2/BiocHubsShiny-about-001.png
• linux-4.3/shinytest2/BiocHubsShiny-selection-001.png
> 
> proc.time()
   user  system elapsed 
 15.794   0.733  17.152