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This page was generated on 2023-10-12 14:51:35 -0400 (Thu, 12 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.2 LTS)x86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4626
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 72/421HostnameOS / ArchINSTALLBUILDCHECK
CopyhelpeR 1.32.0  (landing page)
Oscar Krijgsman
Snapshot Date: 2023-10-12 07:30:02 -0400 (Thu, 12 Oct 2023)
git_url: https://git.bioconductor.org/packages/CopyhelpeR
git_branch: RELEASE_3_17
git_last_commit: fbe09ef
git_last_commit_date: 2023-04-25 10:38:07 -0400 (Tue, 25 Apr 2023)
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

BUILD results for CopyhelpeR on nebbiolo1


To the developers/maintainers of the CopyhelpeR package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: CopyhelpeR
Version: 1.32.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data CopyhelpeR
StartedAt: 2023-10-12 10:19:14 -0400 (Thu, 12 Oct 2023)
EndedAt: 2023-10-12 10:19:21 -0400 (Thu, 12 Oct 2023)
EllapsedTime: 7.0 seconds
RetCode: 0
Status:   OK  
PackageFile: CopyhelpeR_1.32.0.tar.gz
PackageFileSize: 42.66 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data CopyhelpeR
###
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* checking for file ‘CopyhelpeR/DESCRIPTION’ ... OK
* preparing ‘CopyhelpeR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘CopyhelpeR/inst/extdata/hg18_1kb/GC_mappability.rda’
    ‘CopyhelpeR/inst/extdata/hg18_1kb/blacklist.rda’
    ‘CopyhelpeR/inst/extdata/hg19_1kb/GC_mappability.rda’
    ‘CopyhelpeR/inst/extdata/hg19_1kb/blacklist.rda’
    ‘CopyhelpeR/inst/extdata/hg38_1kb/GC_mappability.rda’
    ‘CopyhelpeR/inst/extdata/hg38_1kb/blacklist.rda’
    ‘CopyhelpeR/inst/extdata/mm10_1kb/GC_mappability.rda’
    ‘CopyhelpeR/inst/extdata/mm10_1kb/blacklist.rda’
    ‘CopyhelpeR/inst/extdata/mm10_1kb_4/GC_mappability.rda’
    ‘CopyhelpeR/inst/extdata/mm10_1kb_4/blacklist.rda’
    ‘CopyhelpeR/inst/extdata/mm9_1kb/GC_mappability.rda’
    ‘CopyhelpeR/inst/extdata/mm9_1kb/blacklist.rda’
* building ‘CopyhelpeR_1.32.0.tar.gz’