| Back to Build/check report for BioC 3.17 | 
 | 
This page was generated on 2023-01-02 09:00:56 -0500 (Mon, 02 Jan 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs | 
|---|---|---|---|---|
| palomino5 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" | 4165 | 
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| To the developers/maintainers of the vsclust package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. | 
| Package 2128/2158 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| vsclust 1.1.0  (landing page) Veit Schwaemmle 
 | palomino5 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | ||||||||
| Package: vsclust | 
| Version: 1.1.0 | 
| Command: rm -rf vsclust.buildbin-libdir && mkdir vsclust.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=vsclust.buildbin-libdir vsclust_1.1.0.tar.gz | 
| StartedAt: 2022-12-29 05:54:11 -0500 (Thu, 29 Dec 2022) | 
| EndedAt: 2022-12-29 05:54:50 -0500 (Thu, 29 Dec 2022) | 
| EllapsedTime: 38.6 seconds | 
| RetCode: 0 | 
| Status: OK | 
| PackageFile: vsclust_1.1.0.zip | 
| PackageFileSize: 2.243 MiB | 
##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf vsclust.buildbin-libdir && mkdir vsclust.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=vsclust.buildbin-libdir vsclust_1.1.0.tar.gz
###
##############################################################################
##############################################################################
* installing *source* package 'vsclust' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 12.2.0'
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c vsclust_algo.cpp -o vsclust_algo.o
vsclust_algo.cpp: In function 'void object_memberships(const Rcpp::NumericMatrix&, int, const Rcpp::NumericVector&, int, Rcpp::NumericMatrix&)':
vsclust_algo.cpp:115:12: warning: unused variable 'epsilon' [-Wunused-variable]
  115 |     double epsilon = 0.00001;
      |            ^~~~~~~
vsclust_algo.cpp: In function 'double c_plusplus_means(const Rcpp::NumericMatrix&, Rcpp::NumericMatrix&, Rcpp::NumericVector&, Rcpp::NumericVector&, int, int, double, int, Rcpp::NumericMatrix&, double, Rcpp::IntegerVector&, double, double)':
vsclust_algo.cpp:371:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  371 |       if(verbose)
      |       ^~
vsclust_algo.cpp:374:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  374 |         ermin = new_fitness;
      |         ^~~~~
g++ -std=gnu++11 -shared -s -static-libgcc -o vsclust.dll tmp.def RcppExports.o vsclust_algo.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/vsclust.buildbin-libdir/00LOCK-vsclust/00new/vsclust/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'vsclust' as vsclust_1.1.0.zip
* DONE (vsclust)