Back to Build/check report for BioC 3.17
ABCDEFGHIJKLMNOPQRSTU[V]WXYZ

This page was generated on 2023-01-02 09:00:55 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for variancePartition on palomino5


To the developers/maintainers of the variancePartition package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2108/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
variancePartition 1.29.0  (landing page)
Gabriel E. Hoffman
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/variancePartition
git_branch: master
git_last_commit: 49e3278
git_last_commit_date: 2022-11-01 11:11:59 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  

Summary

Package: variancePartition
Version: 1.29.0
Command: rm -rf variancePartition.buildbin-libdir && mkdir variancePartition.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=variancePartition.buildbin-libdir variancePartition_1.29.0.tar.gz
StartedAt: 2022-12-29 05:53:34 -0500 (Thu, 29 Dec 2022)
EndedAt: 2022-12-29 05:53:55 -0500 (Thu, 29 Dec 2022)
EllapsedTime: 21.3 seconds
RetCode: 0
Status:   OK  
PackageFile: variancePartition_1.29.0.zip
PackageFileSize: 3.679 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf variancePartition.buildbin-libdir && mkdir variancePartition.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=variancePartition.buildbin-libdir variancePartition_1.29.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'variancePartition' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for 'calcVarPart' with signature '"negbin"': no definition for class "negbin"
in method for 'checkModelStatus' with signature '"negbin"': no definition for class "negbin"
Creating a new generic function for 'classifyTestsF' in package 'variancePartition'
Creating a new generic function for 'topTable' in package 'variancePartition'
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'variancePartition' as variancePartition_1.29.0.zip
* DONE (variancePartition)