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This page was generated on 2023-01-02 09:00:53 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for sva on palomino5


To the developers/maintainers of the sva package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1980/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
sva 3.47.0  (landing page)
Jeffrey T. Leek , John D. Storey
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/sva
git_branch: master
git_last_commit: c9e092f
git_last_commit_date: 2022-11-01 11:06:24 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  

Summary

Package: sva
Version: 3.47.0
Command: rm -rf sva.buildbin-libdir && mkdir sva.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=sva.buildbin-libdir sva_3.47.0.tar.gz
StartedAt: 2022-12-29 05:49:46 -0500 (Thu, 29 Dec 2022)
EndedAt: 2022-12-29 05:50:09 -0500 (Thu, 29 Dec 2022)
EllapsedTime: 23.1 seconds
RetCode: 0
Status:   OK  
PackageFile: sva_3.47.0.zip
PackageFileSize: 571 KiB

Command output

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### Running command:
###
###   rm -rf sva.buildbin-libdir && mkdir sva.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=sva.buildbin-libdir sva_3.47.0.tar.gz
###
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* installing *source* package 'sva' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.2.0'
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c sva.c -o sva.o
sva.c:27:34: warning: missing braces around initializer [-Wmissing-braces]
   27 | R_CallMethodDef callMethods[]  = {
      |                                  ^
gcc -shared -s -static-libgcc -o sva.dll tmp.def sva.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/sva.buildbin-libdir/00LOCK-sva/00new/sva/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'sva' as sva_3.47.0.zip
* DONE (sva)