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This page was generated on 2023-01-02 09:00:41 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

CHECK results for oligoClasses on palomino5


To the developers/maintainers of the oligoClasses package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1364/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
oligoClasses 1.61.0  (landing page)
Benilton Carvalho and Robert Scharpf
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/oligoClasses
git_branch: master
git_last_commit: 65d0f5c
git_last_commit_date: 2022-11-01 11:03:35 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  

Summary

Package: oligoClasses
Version: 1.61.0
Command: F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:oligoClasses.install-out.txt --library=F:\biocbuild\bbs-3.17-bioc\R\library --no-vignettes --timings oligoClasses_1.61.0.tar.gz
StartedAt: 2022-12-29 01:55:48 -0500 (Thu, 29 Dec 2022)
EndedAt: 2022-12-29 01:55:51 -0500 (Thu, 29 Dec 2022)
EllapsedTime: 3.0 seconds
RetCode: 1
Status:   ERROR  
CheckDir: oligoClasses.Rcheck
Warnings: NA

Command output

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###
### Running command:
###
###   F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:oligoClasses.install-out.txt --library=F:\biocbuild\bbs-3.17-bioc\R\library --no-vignettes --timings oligoClasses_1.61.0.tar.gz
###
##############################################################################
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* using log directory 'F:/biocbuild/bbs-3.17-bioc-rtools43/meat/oligoClasses.Rcheck'
* using R Under development (unstable) (2022-12-25 r83502 ucrt)
* using platform: x86_64-w64-mingw32 (64-bit)
* R was compiled by
    gcc.exe (GCC) 10.4.0
    GNU Fortran (GCC) 10.4.0
* running under: Windows Server x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'oligoClasses/DESCRIPTION' ... OK
* this is package 'oligoClasses' version '1.61.0'
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages suggested but not available:
  'pd.genomewidesnp.6', 'pd.genomewidesnp.5', 'pd.mapping50k.hind240',
  'pd.mapping50k.xba240', 'pd.mapping250k.sty', 'pd.mapping250k.nsp'

Packages which this enhances but not available for checking:
  'doMC', 'doMPI', 'doRedis'

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section 'The DESCRIPTION file' in the 'Writing R Extensions'
manual.
* DONE

Status: 1 ERROR
See
  'F:/biocbuild/bbs-3.17-bioc-rtools43/meat/oligoClasses.Rcheck/00check.log'
for details.


Installation output


Tests output


Example timings