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This page was generated on 2023-01-02 09:00:39 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for msa on palomino5


To the developers/maintainers of the msa package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1248/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
msa 1.31.2  (landing page)
Ulrich Bodenhofer
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/msa
git_branch: master
git_last_commit: 5447559
git_last_commit_date: 2022-12-14 01:25:02 -0500 (Wed, 14 Dec 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  

Summary

Package: msa
Version: 1.31.2
Command: chmod a+r msa -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data msa
StartedAt: 2022-12-28 19:12:29 -0500 (Wed, 28 Dec 2022)
EndedAt: 2022-12-28 19:19:16 -0500 (Wed, 28 Dec 2022)
EllapsedTime: 407.0 seconds
RetCode: 0
Status:   OK  
PackageFile: msa_1.31.2.tar.gz
PackageFileSize: 4.006 MiB

Command output

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### Running command:
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###   chmod a+r msa -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data msa
###
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* checking for file 'msa/DESCRIPTION' ... OK
* preparing 'msa':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running 'cleanup.win'
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* running 'cleanup.win'
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building 'msa_1.31.2.tar.gz'
Warning: file 'msa/cleanup' did not have execute permissions: corrected
Warning: file 'msa/src/ClustalOmega/configure' did not have execute permissions: corrected
Warning: file 'msa/src/ClustalW/configure' did not have execute permissions: corrected
Warning: file 'msa/src/gc-8.2.2/configure' did not have execute permissions: corrected
Warning: file 'msa/src/gc-8.2.2/libatomic_ops/configure' did not have execute permissions: corrected