Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-01-02 09:00:37 -0500 (Mon, 02 Jan 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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palomino5 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" | 4165 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the metahdep package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1134/2158 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
metahdep 1.57.0 (landing page) John R. Stevens
| palomino5 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | ||||||||
Package: metahdep |
Version: 1.57.0 |
Command: F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL metahdep |
StartedAt: 2022-12-28 15:26:33 -0500 (Wed, 28 Dec 2022) |
EndedAt: 2022-12-28 15:26:48 -0500 (Wed, 28 Dec 2022) |
EllapsedTime: 15.8 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL metahdep ### ############################################################################## ############################################################################## * installing to library 'F:/biocbuild/bbs-3.17-bioc/R/library' * installing *source* package 'metahdep' ... ** using staged installation ** libs using C compiler: 'gcc.exe (GCC) 12.2.0' gcc -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c metahdep.c -o metahdep.o In file included from metahdep.c:3: metahdep.c: In function 'get_row_indices2': F:/biocbuild/bbs-3.17-bioc/R/include/Rinternals.h:197:17: warning: passing argument 5 of 'metan_binary_search_unique' makes integer from pointer without a cast [-Wint-conversion] 197 | #define CHAR(x) R_CHAR(x) | ^~~~~~~~~ | | | const char * metahdep.c:471:107: note: in expansion of macro 'CHAR' 471 | index = metan_binary_search_unique(name_list, sort_index, R_old_names, j, CHAR(STRING_ELT(R_old_chipsets, j)), i); | ^~~~ metahdep.c:372:103: note: expected 'char' but argument is of type 'const char *' 372 | SEXP metan_binary_search_unique(SEXP name_list, SEXP sort_index, SEXP gene_name, int gene_index, char chipset_name, int study_num) | ~~~~~^~~~~~~~~~~~ gcc -shared -s -static-libgcc -o metahdep.dll tmp.def metahdep.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.17-bioc/R/library/00LOCK-metahdep/00new/metahdep/libs/x64 ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metahdep)