Build/check report for BioC 3.17 - BUILD results for maanova on palomino5

Hostname	OS	Arch (*)	R version	Installed pkgs
palomino5	Windows Server 2022 Datacenter	x64	R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences"	4165
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*
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### Running command:
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###   chmod a+r maanova -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data maanova
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* checking for file 'maanova/DESCRIPTION' ... OK
* preparing 'maanova':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package 'maanova' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.2.0'
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c makeratio.c -o makeratio.o
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c masvd.c -o masvd.o
In file included from F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/Lapack.h:40,
                 from masvd.h:1,
                 from masvd.c:17:
masvd.h:14:15: error: conflicting types for 'dgesvd_'; have 'void(const char *, const char *, const int *, const int *, double *, const int *, double *, double *, const int *, double *, const int *, double *, const int *, int *)'
   14 | void F77_NAME(dgesvd)(const char *jobu, const char *jobvt,
      |               ^~~~~~
F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/RS.h:77:25: note: in definition of macro 'F77_CALL'
   77 | # define F77_CALL(x)    x ## _
      |                         ^
masvd.h:14:6: note: in expansion of macro 'F77_NAME'
   14 | void F77_NAME(dgesvd)(const char *jobu, const char *jobvt,
      |      ^~~~~~~~
F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/Lapack.h:348:10: note: previous declaration of 'dgesvd_' with type 'void(const char *, const char *, const int *, const int *, double *, const int *, double *, double *, const int *, double *, const int *, double *, const int *, int *, size_t,  size_t)' {aka 'void(const char *, const char *, const int *, const int *, double *, const int *, double *, double *, const int *, double *, const int *, double *, const int *, int *, long long unsigned int,  long long unsigned int)'}
  348 | F77_NAME(dgesvd)(const char* jobu, const char* jobvt, const int* m,
      |          ^~~~~~
F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/RS.h:77:25: note: in definition of macro 'F77_CALL'
   77 | # define F77_CALL(x)    x ## _
      |                         ^
F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/Lapack.h:348:1: note: in expansion of macro 'F77_NAME'
  348 | F77_NAME(dgesvd)(const char* jobu, const char* jobvt, const int* m,
      | ^~~~~~~~
masvd.c: In function 'masvd':
masvd.c:68:18: error: too few arguments to function 'dgesdd_'
   68 |         F77_CALL(dgesdd)(CHAR(STRING_ELT(jobu, 0)),
      |                  ^~~~~~
F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/RS.h:77:25: note: in definition of macro 'F77_CALL'
   77 | # define F77_CALL(x)    x ## _
      |                         ^
F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/Lapack.h:2397:10: note: declared here
 2397 | F77_NAME(dgesdd)(const char* jobz,
      |          ^~~~~~
F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/RS.h:77:25: note: in definition of macro 'F77_CALL'
   77 | # define F77_CALL(x)    x ## _
      |                         ^
F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/Lapack.h:2397:1: note: in expansion of macro 'F77_NAME'
 2397 | F77_NAME(dgesdd)(const char* jobz,
      | ^~~~~~~~
masvd.c:77:18: error: too few arguments to function 'dgesdd_'
   77 |         F77_CALL(dgesdd)(CHAR(STRING_ELT(jobu, 0)),
      |                  ^~~~~~
masvd.c:77:9: note: in expansion of macro 'F77_CALL'
   77 |         F77_CALL(dgesdd)(CHAR(STRING_ELT(jobu, 0)),
      |         ^~~~~~~~
F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/Lapack.h:2397:10: note: declared here
 2397 | F77_NAME(dgesdd)(const char* jobz,
      |          ^~~~~~
F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/RS.h:77:25: note: in definition of macro 'F77_CALL'
   77 | # define F77_CALL(x)    x ## _
      |                         ^
F:/biocbuild/bbs-3.17-bioc/R/include/R_ext/Lapack.h:2397:1: note: in expansion of macro 'F77_NAME'
 2397 | F77_NAME(dgesdd)(const char* jobz,
      | ^~~~~~~~
masvd.c: At top level:
masvd.c:114:9: warning: "/*" within comment [-Wcomment]
  114 |         /* work on a copy of x */
      |          
masvd.c:154:1: warning: "/*" within comment [-Wcomment]
  154 | /*#ifndef IEEE_754
      |  
masvd.c:161:5: warning: "/*" within comment [-Wcomment]
  161 |     /* work on a copy of x */
      |      
masvd.c:165:9: warning: "/*" within comment [-Wcomment]
  165 |         /* ask for optimal size of work array */
      |          
masvd.c:189:9: warning: "/*" within comment [-Wcomment]
  189 |         /* ask for optimal size of work array */
      |          
make: *** [F:/biocbuild/bbs-3.17-bioc/R/etc/x64/Makeconf:257: masvd.o] Error 1
ERROR: compilation failed for package 'maanova'
* removing 'F:/biocbuild/bbs-3.17-bioc-rtools43/tmpdir/RtmpYPEBBJ/Rinst11108404120/maanova'
      -----------------------------------
ERROR: package installation failed
BUILD results for maanova on palomino5

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