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This page was generated on 2023-01-02 09:00:35 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for katdetectr on palomino5


To the developers/maintainers of the katdetectr package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1003/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
katdetectr 1.1.2  (landing page)
Daan Hazelaar
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/katdetectr
git_branch: master
git_last_commit: 5203eb8
git_last_commit_date: 2022-12-05 12:02:32 -0500 (Mon, 05 Dec 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped

Summary

Package: katdetectr
Version: 1.1.2
Command: chmod a+r katdetectr -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data katdetectr
StartedAt: 2022-12-28 18:45:01 -0500 (Wed, 28 Dec 2022)
EndedAt: 2022-12-28 18:46:03 -0500 (Wed, 28 Dec 2022)
EllapsedTime: 62.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   chmod a+r katdetectr -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data katdetectr
###
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* checking for file 'katdetectr/DESCRIPTION' ... OK
* preparing 'katdetectr':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'General_overview.Rmd' using rmarkdown
Quitting from lines 127-134 (General_overview.Rmd) 
Error: processing vignette 'General_overview.Rmd' failed with diagnostics:
Transformation for secondary axes must be monotonic
--- failed re-building 'General_overview.Rmd'

SUMMARY: processing the following file failed:
  'General_overview.Rmd'

Error: Vignette re-building failed.
Execution halted