| Back to Build/check report for BioC 3.17 |
|
This page was generated on 2023-01-02 09:00:31 -0500 (Mon, 02 Jan 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| palomino5 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" | 4165 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the geneRxCluster package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 754/2158 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| geneRxCluster 1.35.0 (landing page) Charles Berry
| palomino5 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | ||||||||
| Package: geneRxCluster |
| Version: 1.35.0 |
| Command: rm -rf geneRxCluster.buildbin-libdir && mkdir geneRxCluster.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=geneRxCluster.buildbin-libdir geneRxCluster_1.35.0.tar.gz |
| StartedAt: 2022-12-29 05:11:21 -0500 (Thu, 29 Dec 2022) |
| EndedAt: 2022-12-29 05:11:40 -0500 (Thu, 29 Dec 2022) |
| EllapsedTime: 19.0 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: geneRxCluster_1.35.0.zip |
| PackageFileSize: 202.9 KiB |
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### Running command:
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### rm -rf geneRxCluster.buildbin-libdir && mkdir geneRxCluster.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=geneRxCluster.buildbin-libdir geneRxCluster_1.35.0.tar.gz
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* installing *source* package 'geneRxCluster' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.2.0'
gcc -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c cluster.c -o cluster.o
cluster.c: In function 'cutptClean_new_elt':
cluster.c:80:6: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
80 | if (*pvj!=NOTAIL)
| ^
cluster.c: In function 'gRxC_cluster':
cluster.c:682:2: warning: 'cutptFunRes' may be used uninitialized [-Wmaybe-uninitialized]
682 | SET_VECTOR_ELT(final,2,cutptFunRes);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cluster.c:495:7: note: 'cutptFunRes' was declared here
495 | SEXP cutptFunRes;
| ^~~~~~~~~~~
gcc -shared -s -static-libgcc -o geneRxCluster.dll tmp.def cluster.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/geneRxCluster.buildbin-libdir/00LOCK-geneRxCluster/00new/geneRxCluster/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'geneRxCluster' as geneRxCluster_1.35.0.zip
* DONE (geneRxCluster)