Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-01-02 09:00:29 -0500 (Mon, 02 Jan 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
palomino5 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" | 4165 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the flowPeaks package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 690/2158 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
flowPeaks 1.45.0 (landing page) Yongchao Ge
| palomino5 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | ||||||||
Package: flowPeaks |
Version: 1.45.0 |
Command: rm -rf flowPeaks.buildbin-libdir && mkdir flowPeaks.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=flowPeaks.buildbin-libdir flowPeaks_1.45.0.tar.gz |
StartedAt: 2022-12-29 05:09:40 -0500 (Thu, 29 Dec 2022) |
EndedAt: 2022-12-29 05:10:09 -0500 (Thu, 29 Dec 2022) |
EllapsedTime: 28.9 seconds |
RetCode: 0 |
Status: OK |
PackageFile: flowPeaks_1.45.0.zip |
PackageFileSize: 2.087 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf flowPeaks.buildbin-libdir && mkdir flowPeaks.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=flowPeaks.buildbin-libdir flowPeaks_1.45.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'flowPeaks' ... ** using staged installation ** libs using C++ compiler: 'G__~1.EXE (GCC) 12.2.0' rm -f flowPeaks.dll Rpack.o Rregistrate.o VoronoiDiagramGenerator.o flowPeaks.o func_collect.o func_collect_supp.o gvector_gmatrix.o kd_tree.o kmns.o "F:/biocbuild/bbs-3.17-bioc/R/bin/x64/Rscript.exe" "../tools/winlibs.R" 2.4 g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -I/src/include -I../windows/gsl-master/include/gsl -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Rpack.cpp -o Rpack.o Rpack.cpp: In function 'void Rpack_relevel(int*, int*, int*, int*, int*, int*)': Rpack.cpp:141:25: warning: comparison of integer expressions of different signedness: 'std::map<int, int>::size_type' {aka 'long long unsigned int'} and 'int' [-Wsign-compare] 141 | if(levels.size()<(i+1)){ | ~~~~~~~~~~~~~^~~~~~ g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -I/src/include -I../windows/gsl-master/include/gsl -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Rregistrate.cpp -o Rregistrate.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -I/src/include -I../windows/gsl-master/include/gsl -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c VoronoiDiagramGenerator.cpp -o VoronoiDiagramGenerator.o VoronoiDiagramGenerator.cpp: In member function 'void VoronoiDiagramGenerator::out_site(Site*)': VoronoiDiagramGenerator.cpp:803:12: warning: suggest parentheses around operand of '!' or change '&' to '&&' or '!' to '~' [-Wparentheses] 803 | if(!triangulate & plot & !debug) | ^~~~~~~~~~~~ g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -I/src/include -I../windows/gsl-master/include/gsl -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c flowPeaks.cpp -o flowPeaks.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -I/src/include -I../windows/gsl-master/include/gsl -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c func_collect.cpp -o func_collect.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -I/src/include -I../windows/gsl-master/include/gsl -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c func_collect_supp.cpp -o func_collect_supp.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -I/src/include -I../windows/gsl-master/include/gsl -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c gvector_gmatrix.cpp -o gvector_gmatrix.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -I/src/include -I../windows/gsl-master/include/gsl -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kd_tree.cpp -o kd_tree.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -I/src/include -I../windows/gsl-master/include/gsl -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kmns.cpp -o kmns.o g++ -std=gnu++11 -shared -s -static-libgcc -o flowPeaks.dll tmp.def Rpack.o Rregistrate.o VoronoiDiagramGenerator.o flowPeaks.o func_collect.o func_collect_supp.o gvector_gmatrix.o kd_tree.o kmns.o -L../windows/gsl-master/lib/x64 -lgsl -lgslcblas -lm -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/flowPeaks.buildbin-libdir/00LOCK-flowPeaks/00new/flowPeaks/libs/x64 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'flowPeaks' as flowPeaks_1.45.0.zip * DONE (flowPeaks)