Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-01-02 09:00:23 -0500 (Mon, 02 Jan 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
palomino5 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" | 4165 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the cn.mops package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 353/2158 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
cn.mops 1.45.0 (landing page) Gundula Povysil
| palomino5 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | ||||||||
Package: cn.mops |
Version: 1.45.0 |
Command: rm -rf cn.mops.buildbin-libdir && mkdir cn.mops.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=cn.mops.buildbin-libdir cn.mops_1.45.0.tar.gz |
StartedAt: 2022-12-29 04:58:53 -0500 (Thu, 29 Dec 2022) |
EndedAt: 2022-12-29 04:59:32 -0500 (Thu, 29 Dec 2022) |
EllapsedTime: 39.2 seconds |
RetCode: 0 |
Status: OK |
PackageFile: cn.mops_1.45.0.zip |
PackageFileSize: 1.625 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf cn.mops.buildbin-libdir && mkdir cn.mops.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=cn.mops.buildbin-libdir cn.mops_1.45.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'cn.mops' ... ** using staged installation ** libs using C compiler: 'gcc.exe (GCC) 12.2.0' using C++ compiler: 'G__~1.EXE (GCC) 12.2.0' gcc -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c R_init_cnmops.c -o R_init_cnmops.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cnmops.cpp -o cnmops.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c segment.cpp -o segment.o segment.cpp: In function 'SEXPREC* segment(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)': segment.cpp:59:27: warning: variable 'globalSd' set but not used [-Wunused-but-set-variable] 59 | double globalMean,globalSd,diff,M2,globalVariance; | ^~~~~~~~ segment.cpp:60:16: warning: variable 'oldStatistic' set but not used [-Wunused-but-set-variable] 60 | double oldStatistic, meanLeft,meanRight,varLeft,varRight; | ^~~~~~~~~~~~ segment.cpp:61:38: warning: variable 'maxStatistic' set but not used [-Wunused-but-set-variable] 61 | double newStatistic,meanDiff,maxStatistic,DOF,a,b,eps1; | ^~~~~~~~~~~~ segment.cpp:62:47: warning: variable 'maxIdx' set but not used [-Wunused-but-set-variable] 62 | double newPValue, maxPValue,oldPValue,maxIdx; | ^~~~~~ In file included from segment.cpp:10: F:/biocbuild/bbs-3.17-bioc/R/include/Rmath.h:210:25: warning: unused variable 'Rf_beta' [-Wunused-variable] 210 | #define beta Rf_beta | ^~~~~~~ segment.cpp:64:16: note: in expansion of macro 'beta' 64 | double beta,nn; | ^~~~ g++ -std=gnu++11 -shared -s -static-libgcc -o cn.mops.dll tmp.def R_init_cnmops.o cnmops.o segment.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/cn.mops.buildbin-libdir/00LOCK-cn.mops/00new/cn.mops/libs/x64 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'cn.mops' as cn.mops_1.45.0.zip * DONE (cn.mops)