Back to Build/check report for BioC 3.17
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

This page was generated on 2023-01-02 09:00:55 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for TurboNorm on palomino5


To the developers/maintainers of the TurboNorm package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2085/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TurboNorm 1.47.0  (landing page)
Maarten van Iterson
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/TurboNorm
git_branch: master
git_last_commit: ff31fe9
git_last_commit_date: 2022-11-01 11:05:29 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  

Summary

Package: TurboNorm
Version: 1.47.0
Command: rm -rf TurboNorm.buildbin-libdir && mkdir TurboNorm.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=TurboNorm.buildbin-libdir TurboNorm_1.47.0.tar.gz
StartedAt: 2022-12-29 05:53:01 -0500 (Thu, 29 Dec 2022)
EndedAt: 2022-12-29 05:53:15 -0500 (Thu, 29 Dec 2022)
EllapsedTime: 13.9 seconds
RetCode: 0
Status:   OK  
PackageFile: TurboNorm_1.47.0.zip
PackageFileSize: 2.056 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf TurboNorm.buildbin-libdir && mkdir TurboNorm.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=TurboNorm.buildbin-libdir TurboNorm_1.47.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'TurboNorm' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.2.0'
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c Rinit.c -o Rinit.o
Rinit.c:8:40: warning: missing braces around initializer [-Wmissing-braces]
    8 | static const R_CMethodDef cMethods[] = {
      |                                        ^
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c binners.c -o binners.o
gcc -shared -s -static-libgcc -o TurboNorm.dll tmp.def Rinit.o binners.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/TurboNorm.buildbin-libdir/00LOCK-TurboNorm/00new/TurboNorm/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'TurboNorm' as TurboNorm_1.47.0.zip
* DONE (TurboNorm)