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This page was generated on 2023-01-02 09:00:54 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
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BUILD results for Travel on palomino5


To the developers/maintainers of the Travel package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2062/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Travel 1.7.0  (landing page)
Jiefei Wang
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/Travel
git_branch: master
git_last_commit: 8ef40d3
git_last_commit_date: 2022-11-01 11:23:56 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped

Summary

Package: Travel
Version: 1.7.0
Command: chmod a+r Travel -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Travel
StartedAt: 2022-12-28 21:02:35 -0500 (Wed, 28 Dec 2022)
EndedAt: 2022-12-28 21:03:05 -0500 (Wed, 28 Dec 2022)
EllapsedTime: 30.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   chmod a+r Travel -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Travel
###
##############################################################################
##############################################################################


* checking for file 'Travel/DESCRIPTION' ... OK
* preparing 'Travel':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package 'Travel' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 12.2.0'
using C++11
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:\Program Files\Dokan\Dokan Library-1.5.1\include" -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Cpp_interface.cpp -o Cpp_interface.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:\Program Files\Dokan\Dokan Library-1.5.1\include" -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:\Program Files\Dokan\Dokan Library-1.5.1\include" -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c altfile_operations.cpp -o altfile_operations.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:\Program Files\Dokan\Dokan Library-1.5.1\include" -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c altmmap_operations.cpp -o altmmap_operations.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:\Program Files\Dokan\Dokan Library-1.5.1\include" -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c altrep_manager.cpp -o altrep_manager.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:\Program Files\Dokan\Dokan Library-1.5.1\include" -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c class_Cache_block.cpp -o class_Cache_block.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:\Program Files\Dokan\Dokan Library-1.5.1\include" -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c class_Filesystem_cache_copier.cpp -o class_Filesystem_cache_copier.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"C:\Program Files\Dokan\Dokan Library-1.5.1\include" -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c class_Filesystem_file_data.cpp -o class_Filesystem_file_data.o
In file included from class_Filesystem_file_data.h:5,
                 from class_Filesystem_file_data.cpp:1:
class_Cache_block.h:10:5: error: 'size_t' does not name a type
   10 |     size_t size;
      |     ^~~~~~
class_Cache_block.h:1:1: note: 'size_t' is defined in header '<cstddef>'; did you forget to '#include <cstddef>'?
  +++ |+#include <cstddef>
    1 | #ifndef HEADER_CACHE_BLOCK
class_Cache_block.h:11:5: error: 'size_t' does not name a type
   11 |     size_t *counter = nullptr;
      |     ^~~~~~
class_Cache_block.h:11:5: note: 'size_t' is defined in header '<cstddef>'; did you forget to '#include <cstddef>'?
class_Cache_block.h:14:23: error: expected ')' before 'size'
   14 |     Cache_block(size_t size);
      |                ~      ^~~~~
      |                       )
class_Cache_block.h:21:5: error: 'size_t' does not name a type
   21 |     size_t use_count() const;
      |     ^~~~~~
class_Cache_block.h:21:5: note: 'size_t' is defined in header '<cstddef>'; did you forget to '#include <cstddef>'?
class_Cache_block.h:23:5: error: 'size_t' does not name a type
   23 |     size_t get_size() const;
      |     ^~~~~~
class_Cache_block.h:23:5: note: 'size_t' is defined in header '<cstddef>'; did you forget to '#include <cstddef>'?
class_Cache_block.h:27:5: error: 'size_t' does not name a type
   27 |     size_t get_serialize_size() const;
      |     ^~~~~~
class_Cache_block.h:27:5: note: 'size_t' is defined in header '<cstddef>'; did you forget to '#include <cstddef>'?
class_Filesystem_file_data.cpp: In member function 'size_t Filesystem_file_data::get_serialize_size()':
class_Filesystem_file_data.cpp:70:26: error: 'const class Cache_block' has no member named 'get_serialize_size'
   70 |         size += i.second.get_serialize_size();
      |                          ^~~~~~~~~~~~~~~~~~
class_Filesystem_file_data.cpp: In member function 'void Filesystem_file_data::serialize(void*)':
class_Filesystem_file_data.cpp:92:39: error: 'const class Cache_block' has no member named 'get_serialize_size'
   92 |         size_t buffer_size = i.second.get_serialize_size();
      |                                       ^~~~~~~~~~~~~~~~~~
class_Filesystem_file_data.cpp: In member function 'void Filesystem_cache_index_iterator::compute_block_info()':
class_Filesystem_file_data.cpp:177:39: error: 'class Cache_block' has no member named 'get_size'
  177 |     block_length = block_iter->second.get_size() / type_size;
      |                                       ^~~~~~~~
make: *** [F:/biocbuild/bbs-3.17-bioc/R/etc/x64/Makeconf:264: class_Filesystem_file_data.o] Error 1
ERROR: compilation failed for package 'Travel'
* removing 'F:/biocbuild/bbs-3.17-bioc-rtools43/tmpdir/RtmpqKJ2WU/Rinstc6477a632a9/Travel'
      -----------------------------------
ERROR: package installation failed