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This page was generated on 2023-01-02 09:00:52 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
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INSTALL results for SPONGE on palomino5


To the developers/maintainers of the SPONGE package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1932/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SPONGE 1.21.0  (landing page)
Markus List
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/SPONGE
git_branch: master
git_last_commit: 5505a9e
git_last_commit_date: 2022-11-01 11:16:13 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  

Summary

Package: SPONGE
Version: 1.21.0
Command: F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL SPONGE
StartedAt: 2022-12-28 16:26:57 -0500 (Wed, 28 Dec 2022)
EndedAt: 2022-12-28 16:28:21 -0500 (Wed, 28 Dec 2022)
EllapsedTime: 84.1 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL SPONGE
###
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* installing to library 'F:/biocbuild/bbs-3.17-bioc/R/library'
* installing *source* package 'SPONGE' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'Biobase::combine' by 'dplyr::combine' when loading 'SPONGE'
Warning: replacing previous import 'biomaRt::select' by 'dplyr::select' when loading 'SPONGE'
Warning: replacing previous import 'cvms::font' by 'ggpubr::font' when loading 'SPONGE'
Warning: replacing previous import 'ggplot2::margin' by 'randomForest::margin' when loading 'SPONGE'
Warning: replacing previous import 'dplyr::combine' by 'randomForest::combine' when loading 'SPONGE'
Warning: replacing previous import 'Biobase::exprs' by 'rlang::exprs' when loading 'SPONGE'
Warning: replacing previous import 'rlang::exprs' by 'Biobase::exprs' when loading 'SPONGE'
Note: next used in wrong context: no loop is visible 
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'Biobase::combine' by 'dplyr::combine' when loading 'SPONGE'
Warning: replacing previous import 'biomaRt::select' by 'dplyr::select' when loading 'SPONGE'
Warning: replacing previous import 'cvms::font' by 'ggpubr::font' when loading 'SPONGE'
Warning: replacing previous import 'ggplot2::margin' by 'randomForest::margin' when loading 'SPONGE'
Warning: replacing previous import 'dplyr::combine' by 'randomForest::combine' when loading 'SPONGE'
Warning: replacing previous import 'Biobase::exprs' by 'rlang::exprs' when loading 'SPONGE'
Warning: replacing previous import 'rlang::exprs' by 'Biobase::exprs' when loading 'SPONGE'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'Biobase::combine' by 'dplyr::combine' when loading 'SPONGE'
Warning: replacing previous import 'biomaRt::select' by 'dplyr::select' when loading 'SPONGE'
Warning: replacing previous import 'cvms::font' by 'ggpubr::font' when loading 'SPONGE'
Warning: replacing previous import 'ggplot2::margin' by 'randomForest::margin' when loading 'SPONGE'
Warning: replacing previous import 'dplyr::combine' by 'randomForest::combine' when loading 'SPONGE'
Warning: replacing previous import 'Biobase::exprs' by 'rlang::exprs' when loading 'SPONGE'
Warning: replacing previous import 'rlang::exprs' by 'Biobase::exprs' when loading 'SPONGE'
** testing if installed package keeps a record of temporary installation path
* DONE (SPONGE)