| Back to Build/check report for BioC 3.17 |
|
This page was generated on 2023-01-02 09:00:48 -0500 (Mon, 02 Jan 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| palomino5 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" | 4165 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the Rqc package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1708/2158 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Rqc 1.33.0 (landing page) Welliton Souza
| palomino5 | Windows Server 2022 Datacenter / x64 | OK | OK | TIMEOUT | OK | ||||||||
| Package: Rqc |
| Version: 1.33.0 |
| Command: rm -rf Rqc.buildbin-libdir && mkdir Rqc.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=Rqc.buildbin-libdir Rqc_1.33.0.tar.gz |
| StartedAt: 2022-12-29 05:40:21 -0500 (Thu, 29 Dec 2022) |
| EndedAt: 2022-12-29 05:41:26 -0500 (Thu, 29 Dec 2022) |
| EllapsedTime: 64.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: Rqc_1.33.0.zip |
| PackageFileSize: 1.048 MiB |
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### Running command:
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### rm -rf Rqc.buildbin-libdir && mkdir Rqc.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=Rqc.buildbin-libdir Rqc_1.33.0.tar.gz
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* installing *source* package 'Rqc' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 12.2.0'
g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RRDNA.cpp -o RRDNA.o
RRDNA.cpp: In function 'Rcpp::StringVector toRRDNA(Rcpp::StringVector)':
RRDNA.cpp:51:27: warning: comparison of integer expressions of different signedness: 'R_len_t' {aka 'int'} and 'std::__cxx11::basic_string<char>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
51 | for (j = 0; j < dna.size(); j+=3)
| ~~^~~~~~~~~~~~
RRDNA.cpp: In function 'Rcpp::StringVector fromRRDNA(Rcpp::StringVector)':
RRDNA.cpp:102:22: warning: comparison of integer expressions of different signedness: 'R_len_t' {aka 'int'} and 'std::__cxx11::basic_string<char>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
102 | for(j = 1; j < rrdna.size(); ++j) {
| ~~^~~~~~~~~~~~~~
g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -shared -s -static-libgcc -o Rqc.dll tmp.def RRDNA.o RcppExports.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/Rqc.buildbin-libdir/00LOCK-Rqc/00new/Rqc/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'Rqc' as Rqc_1.33.0.zip
* DONE (Rqc)