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This page was generated on 2023-01-02 09:00:46 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for ReactomeGSA on palomino5


To the developers/maintainers of the ReactomeGSA package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1610/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ReactomeGSA 1.13.0  (landing page)
Johannes Griss
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/ReactomeGSA
git_branch: master
git_last_commit: feb481b
git_last_commit_date: 2022-11-01 11:20:32 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  

Summary

Package: ReactomeGSA
Version: 1.13.0
Command: rm -rf ReactomeGSA.buildbin-libdir && mkdir ReactomeGSA.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=ReactomeGSA.buildbin-libdir ReactomeGSA_1.13.0.tar.gz
StartedAt: 2022-12-29 05:36:21 -0500 (Thu, 29 Dec 2022)
EndedAt: 2022-12-29 05:36:39 -0500 (Thu, 29 Dec 2022)
EllapsedTime: 17.7 seconds
RetCode: 0
Status:   OK  
PackageFile: ReactomeGSA_1.13.0.zip
PackageFileSize: 429.9 KiB

Command output

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### Running command:
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###   rm -rf ReactomeGSA.buildbin-libdir && mkdir ReactomeGSA.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=ReactomeGSA.buildbin-libdir ReactomeGSA_1.13.0.tar.gz
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* installing *source* package 'ReactomeGSA' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
in method for 'analyse_sc_clusters' with signature 'object="Seurat"': no definition for class "Seurat"
in method for 'analyse_sc_clusters' with signature 'object="SingleCellExperiment"': no definition for class "SingleCellExperiment"
in method for 'add_dataset' with signature 'request="ReactomeAnalysisRequest",expression_values="EList"': no definition for class "EList"
in method for 'add_dataset' with signature 'request="ReactomeAnalysisRequest",expression_values="DGEList"': no definition for class "DGEList"
in method for 'add_dataset' with signature 'request="ReactomeAnalysisRequest",expression_values="ExpressionSet"': no definition for class "ExpressionSet"
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'ReactomeGSA' as ReactomeGSA_1.13.0.zip
* DONE (ReactomeGSA)