Back to Build/check report for BioC 3.17
ABC[D]EFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2023-01-02 09:00:26 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for DEScan2 on palomino5


To the developers/maintainers of the DEScan2 package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 510/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DEScan2 1.19.0  (landing page)
Dario Righelli
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/DEScan2
git_branch: master
git_last_commit: f5d07fe
git_last_commit_date: 2022-11-01 11:17:18 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  

Summary

Package: DEScan2
Version: 1.19.0
Command: rm -rf DEScan2.buildbin-libdir && mkdir DEScan2.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=DEScan2.buildbin-libdir DEScan2_1.19.0.tar.gz
StartedAt: 2022-12-29 05:03:56 -0500 (Thu, 29 Dec 2022)
EndedAt: 2022-12-29 05:04:53 -0500 (Thu, 29 Dec 2022)
EllapsedTime: 56.7 seconds
RetCode: 0
Status:   OK  
PackageFile: DEScan2_1.19.0.zip
PackageFileSize: 2.848 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf DEScan2.buildbin-libdir && mkdir DEScan2.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=DEScan2.buildbin-libdir DEScan2_1.19.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'DEScan2' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 12.2.0'
using C++11
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/RcppArmadillo/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/RcppArmadillo/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c rcpparma_max_win.cpp -o rcpparma_max_win.o
g++ -shared -s -static-libgcc -o DEScan2.dll tmp.def RcppExports.o rcpparma_max_win.o -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lRlapack -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/DEScan2.buildbin-libdir/00LOCK-DEScan2/00new/DEScan2/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'DEScan2' as DEScan2_1.19.0.zip
* DONE (DEScan2)