Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-01-02 09:00:21 -0500 (Mon, 02 Jan 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
palomino5 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" | 4165 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the BufferedMatrix package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 227/2158 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
BufferedMatrix 1.63.0 (landing page) Ben Bolstad
| palomino5 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | ||||||||
Package: BufferedMatrix |
Version: 1.63.0 |
Command: rm -rf BufferedMatrix.buildbin-libdir && mkdir BufferedMatrix.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=BufferedMatrix.buildbin-libdir BufferedMatrix_1.63.0.tar.gz |
StartedAt: 2022-12-29 04:54:39 -0500 (Thu, 29 Dec 2022) |
EndedAt: 2022-12-29 04:54:53 -0500 (Thu, 29 Dec 2022) |
EllapsedTime: 13.7 seconds |
RetCode: 0 |
Status: OK |
PackageFile: BufferedMatrix_1.63.0.zip |
PackageFileSize: 567.1 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf BufferedMatrix.buildbin-libdir && mkdir BufferedMatrix.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=BufferedMatrix.buildbin-libdir BufferedMatrix_1.63.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'BufferedMatrix' ... ** using staged installation ** libs using C compiler: 'gcc.exe (GCC) 12.2.0' gcc -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c RBufferedMatrix.c -o RBufferedMatrix.o gcc -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c doubleBufferedMatrix.c -o doubleBufferedMatrix.o doubleBufferedMatrix.c: In function 'dbm_ReadOnlyMode': doubleBufferedMatrix.c:1580:7: warning: suggest parentheses around operand of '!' or change '&' to '&&' or '!' to '~' [-Wparentheses] 1580 | if (!(Matrix->readonly) & setting){ | ^~~~~~~~~~~~~~~~~~~ doubleBufferedMatrix.c: At top level: doubleBufferedMatrix.c:3327:12: warning: 'sort_double' defined but not used [-Wunused-function] 3327 | static int sort_double(const double *a1,const double *a2){ | ^~~~~~~~~~~ gcc -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c doubleBufferedMatrix_C_tests.c -o doubleBufferedMatrix_C_tests.o gcc -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c init_package.c -o init_package.o gcc -shared -s -static-libgcc -o BufferedMatrix.dll tmp.def RBufferedMatrix.o doubleBufferedMatrix.o doubleBufferedMatrix_C_tests.o init_package.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/BufferedMatrix.buildbin-libdir/00LOCK-BufferedMatrix/00new/BufferedMatrix/libs/x64 ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for 'rowMeans' in package 'BufferedMatrix' Creating a new generic function for 'rowSums' in package 'BufferedMatrix' Creating a new generic function for 'colMeans' in package 'BufferedMatrix' Creating a new generic function for 'colSums' in package 'BufferedMatrix' Creating a generic function for 'ncol' from package 'base' in package 'BufferedMatrix' Creating a generic function for 'nrow' from package 'base' in package 'BufferedMatrix' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'BufferedMatrix' as BufferedMatrix_1.63.0.zip * DONE (BufferedMatrix)