| Back to Build/check report for BioC 3.17 |
|
This page was generated on 2023-01-02 09:00:21 -0500 (Mon, 02 Jan 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| palomino5 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" | 4165 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the BUS package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 233/2158 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BUS 1.55.0 (landing page) Yuanhua Liu
| palomino5 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | ||||||||
| Package: BUS |
| Version: 1.55.0 |
| Command: rm -rf BUS.buildbin-libdir && mkdir BUS.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=BUS.buildbin-libdir BUS_1.55.0.tar.gz |
| StartedAt: 2022-12-29 04:54:51 -0500 (Thu, 29 Dec 2022) |
| EndedAt: 2022-12-29 04:55:05 -0500 (Thu, 29 Dec 2022) |
| EllapsedTime: 13.6 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: BUS_1.55.0.zip |
| PackageFileSize: 2.098 MiB |
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### Running command:
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### rm -rf BUS.buildbin-libdir && mkdir BUS.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=BUS.buildbin-libdir BUS_1.55.0.tar.gz
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* installing *source* package 'BUS' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 12.2.0'
g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c BUS.cpp -o BUS.o
BUS.cpp: In function 'SEXPREC* MINempirical(SEXP, SEXP, SEXP, SEXP, SEXP)':
BUS.cpp:22:7: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
22 | for( int i=0; i<*ncols1; ++i )
| ^~~
In file included from F:/biocbuild/bbs-3.17-bioc/R/include/Rdefines.h:41,
from BUS.h:9,
from BUS.cpp:1:
F:/biocbuild/bbs-3.17-bioc/R/include/Rinternals.h:369:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
369 | #define UNPROTECT(n) Rf_unprotect(n)
| ^~~~~~~~~~~~
BUS.cpp:27:10: note: in expansion of macro 'UNPROTECT'
27 | UNPROTECT(6);
| ^~~~~~~~~
g++ -std=gnu++11 -shared -s -static-libgcc -o BUS.dll tmp.def BUS.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/BUS.buildbin-libdir/00LOCK-BUS/00new/BUS/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'BUS' as BUS_1.55.0.zip
* DONE (BUS)