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This page was generated on 2023-01-02 09:00:18 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
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BUILD results for AnnotationForge on palomino5


To the developers/maintainers of the AnnotationForge package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 57/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AnnotationForge 1.41.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/AnnotationForge
git_branch: master
git_last_commit: e247a06
git_last_commit_date: 2022-11-01 11:07:07 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  

Summary

Package: AnnotationForge
Version: 1.41.0
Command: chmod a+r AnnotationForge -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data AnnotationForge
StartedAt: 2022-12-28 16:37:38 -0500 (Wed, 28 Dec 2022)
EndedAt: 2022-12-28 16:40:43 -0500 (Wed, 28 Dec 2022)
EllapsedTime: 185.5 seconds
RetCode: 0
Status:   OK  
PackageFile: AnnotationForge_1.41.0.tar.gz
PackageFileSize: 3.736 MiB

Command output

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###
### Running command:
###
###   chmod a+r AnnotationForge -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data AnnotationForge
###
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* checking for file 'AnnotationForge/DESCRIPTION' ... OK
* preparing 'AnnotationForge':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/BASEPKG.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/COELICOLOR.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/GO.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/INPARANOID.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/KEGG.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/MALARIA.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/NCBICHIP.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/NCBIORG.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/NOCHIPSCHEMA.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/NOSCHEMA.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/ORGANISM.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/ORTHOLOGY.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/PFAM.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/YEAST.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/YEASTCHIP.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/AnnDbPkg-templates/YEASTNCBI.DB/inst/extdata' is empty
WARNING: directory 'AnnotationForge/inst/ProbePkg-template/data' is empty
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    'AnnotationForge/inst/extdata/viableIDs.rda'
* building 'AnnotationForge_1.41.0.tar.gz'