| Back to Build/check report for BioC 3.17 |
|
This page was generated on 2023-01-02 09:00:17 -0500 (Mon, 02 Jan 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| palomino5 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" | 4165 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the ACME package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 13/2158 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ACME 2.55.0 (landing page) Sean Davis
| palomino5 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | ||||||||
| Package: ACME |
| Version: 2.55.0 |
| Command: rm -rf ACME.buildbin-libdir && mkdir ACME.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=ACME.buildbin-libdir ACME_2.55.0.tar.gz |
| StartedAt: 2022-12-29 04:48:24 -0500 (Thu, 29 Dec 2022) |
| EndedAt: 2022-12-29 04:48:44 -0500 (Thu, 29 Dec 2022) |
| EllapsedTime: 20.0 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: ACME_2.55.0.zip |
| PackageFileSize: 10.01 MiB |
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### Running command:
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### rm -rf ACME.buildbin-libdir && mkdir ACME.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=ACME.buildbin-libdir ACME_2.55.0.tar.gz
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* installing *source* package 'ACME' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.2.0'
gcc -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c windowChisq.c -o windowChisq.o
windowChisq.c: In function 'windowChisq':
windowChisq.c:58:21: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
58 | firstprobe>0) {
| ~~~~~~~~~~^~
windowChisq.c:63:20: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
63 | lastprobe<(na-1)) {
| ~~~~~~~~~^~~~~~~
windowChisq.c:21:11: warning: unused variable 'xa' [-Wunused-variable]
21 | double *xa,*xlocations,*xchivals;
| ^~
windowChisq.c: At top level:
windowChisq.c:86:20: warning: initialization of 'void * (*)(void)' from incompatible pointer type 'struct SEXPREC * (*)(struct SEXPREC *, struct SEXPREC *, struct SEXPREC *, struct SEXPREC *, struct SEXPREC *)' [-Wincompatible-pointer-types]
86 | {"windowChisq",&windowChisq,5},
| ^
windowChisq.c:86:20: note: (near initialization for 'callMethods[0].fun')
gcc -shared -s -static-libgcc -o ACME.dll tmp.def windowChisq.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/ACME.buildbin-libdir/00LOCK-ACME/00new/ACME/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'ACME' as ACME_2.55.0.zip
* DONE (ACME)