Britta Velten
| Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_17 |
| git_last_commit: 503e2c9 |
| git_last_commit_date: 2023-05-01 20:10:30 -0400 (Mon, 01 May 2023) |
| Back to Mac ARM64 build report for BioC 3.17 |
|
This page was generated on 2023-10-20 09:38:03 -0400 (Fri, 20 Oct 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kjohnson2 | macOS 12.6.1 Monterey | arm64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4347 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 875/2230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.16.1 (landing page) Britta Velten
| kjohnson2 | macOS 12.6.1 Monterey / arm64 | OK | OK | OK | OK | | |||||||
|
To the developers/maintainers of the graper package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.16.1 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.16.1.tar.gz |
| StartedAt: 2023-10-17 23:23:46 -0400 (Tue, 17 Oct 2023) |
| EndedAt: 2023-10-17 23:25:35 -0400 (Tue, 17 Oct 2023) |
| EllapsedTime: 109.7 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.16.1.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/graper.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: aarch64-apple-darwin20 (64-bit)
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
* running under: macOS Monterey 12.6.7
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.16.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library’ * installing *source* package ‘graper’ ... ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using C++11 using SDK: ‘MacOSX11.3.sdk’ clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ld: warning: could not create compact unwind for ___emutls_get_address: registers 23 and 24 not saved contiguously in frame installing to /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.3.1 (2023-06-16) -- "Beagle Scouts"
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-860.185
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-599.855
ELB improved by 260.33
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-539.604
ELB improved by 60.2512
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.285
ELB improved by 49.3194
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.671
ELB improved by 27.6135
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.399
ELB improved by 11.2725
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.178
ELB improved by 5.22074
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.358
ELB improved by 3.81972
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.023
ELB improved by 3.33507
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.906
ELB improved by 3.1174
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.9
ELB improved by 3.00595
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.993
ELB improved by 2.90628
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.259
ELB improved by 2.73444
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.836
ELB improved by 2.42269
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.862
ELB improved by 1.97422
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.382
ELB improved by 1.47985
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.337
ELB improved by 1.04565
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.615
ELB improved by 0.721986
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.111
ELB improved by 0.503718
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.747
ELB improved by 0.363696
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.472
ELB improved by 0.275049
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.254
ELB improved by 0.218101
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.074
ELB improved by 0.18038
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.919
ELB improved by 0.154604
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.782
ELB improved by 0.136598
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.659
ELB improved by 0.123874
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.544
ELB improved by 0.114859
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.435
ELB improved by 0.108529
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.331
ELB improved by 0.104208
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.23
ELB improved by 0.10145
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.13
ELB improved by 0.0999526
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.03
ELB improved by 0.0995103
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.93
ELB improved by 0.0999769
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.829
ELB improved by 0.101247
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.726
ELB improved by 0.103242
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.62
ELB improved by 0.105907
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.51
ELB improved by 0.109205
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.397
ELB improved by 0.113119
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.28
ELB improved by 0.117656
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.157
ELB improved by 0.122846
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.028
ELB improved by 0.128742
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.893
ELB improved by 0.135386
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.75
ELB improved by 0.142739
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.599
ELB improved by 0.150545
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.441
ELB improved by 0.158169
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.277
ELB improved by 0.164575
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.108
ELB improved by 0.168665
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.938
ELB improved by 0.169885
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.77
ELB improved by 0.168557
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.604
ELB improved by 0.165564
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.442
ELB improved by 0.161784
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.284
ELB improved by 0.15781
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.13
ELB improved by 0.153975
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.98
ELB improved by 0.150472
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.833
ELB improved by 0.147421
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.688
ELB improved by 0.144898
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.545
ELB improved by 0.142945
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.403
ELB improved by 0.141569
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.262
ELB improved by 0.140744
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.122
ELB improved by 0.140418
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.981
ELB improved by 0.140516
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.841
ELB improved by 0.140942
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.699
ELB improved by 0.14159
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.557
ELB improved by 0.142346
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.413
ELB improved by 0.143101
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.27
ELB improved by 0.143761
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.125
ELB improved by 0.144263
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.981
ELB improved by 0.144595
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.836
ELB improved by 0.14482
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.691
ELB improved by 0.145099
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.545
ELB improved by 0.145729
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.398
ELB improved by 0.147181
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.248
ELB improved by 0.150175
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.092
ELB improved by 0.155799
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.926
ELB improved by 0.165745
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.744
ELB improved by 0.182715
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.533
ELB improved by 0.211085
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.275
ELB improved by 0.257609
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.944
ELB improved by 0.330855
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.508
ELB improved by 0.436373
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.939
ELB improved by 0.568499
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.245
ELB improved by 0.694014
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.54
ELB improved by 0.705561
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.979
ELB improved by 0.560466
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.586
ELB improved by 0.39275
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.314
ELB improved by 0.271914
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.119
ELB improved by 0.195328
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.967
ELB improved by 0.151744
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.836
ELB improved by 0.131582
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.711
ELB improved by 0.124787
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.59
ELB improved by 0.120688
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.479
ELB improved by 0.111855
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.381
ELB improved by 0.0977265
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.299
ELB improved by 0.0821299
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.231
ELB improved by 0.0678434
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.176
ELB improved by 0.0552131
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.132
ELB improved by 0.0437966
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.098
ELB improved by 0.0335065
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.074
ELB improved by 0.0247105
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.056
ELB improved by 0.0178053
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.043
ELB improved by 0.0128377
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.033
ELB improved by 0.00949949
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-866.146
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.421
ELB improved by 297.725
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.027
ELB improved by 58.3945
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.046
ELB improved by 33.9812
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.117
ELB improved by 14.9288
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.922
ELB improved by 7.19493
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.371
ELB improved by 4.55151
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.644
ELB improved by 3.72676
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.161
ELB improved by 3.48286
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.71
ELB improved by 3.45094
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.249
ELB improved by 3.46108
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.859
ELB improved by 3.3898
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.719
ELB improved by 3.14019
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.036
ELB improved by 2.68275
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.919
ELB improved by 2.11754
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.29
ELB improved by 1.62848
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.977
ELB improved by 1.31319
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.878
ELB improved by 1.09918
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.997
ELB improved by 0.880394
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.324
ELB improved by 0.673306
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.806
ELB improved by 0.517996
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.393
ELB improved by 0.413404
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.049
ELB improved by 0.343569
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.755
ELB improved by 0.294469
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.497
ELB improved by 0.257249
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.27
ELB improved by 0.227083
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.069
ELB improved by 0.20149
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.89
ELB improved by 0.179206
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.73
ELB improved by 0.159566
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.588
ELB improved by 0.14219
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.461
ELB improved by 0.126823
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.348
ELB improved by 0.113259
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.246
ELB improved by 0.101309
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.156
ELB improved by 0.0907939
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.074
ELB improved by 0.0815441
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.001
ELB improved by 0.0734019
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.934
ELB improved by 0.0662247
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.875
ELB improved by 0.0598861
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.82
ELB improved by 0.0542762
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.771
ELB improved by 0.0493001
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.726
ELB improved by 0.0448762
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.685
ELB improved by 0.0409348
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.648
ELB improved by 0.0374159
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.614
ELB improved by 0.0342679
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.582
ELB improved by 0.0314463
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.553
ELB improved by 0.0289124
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.527
ELB improved by 0.0266327
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.502
ELB improved by 0.0245779
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.479
ELB improved by 0.0227226
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.458
ELB improved by 0.0210444
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.439
ELB improved by 0.019524
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.421
ELB improved by 0.0181442
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.404
ELB improved by 0.0168902
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.388
ELB improved by 0.0157488
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.373
ELB improved by 0.0147085
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.359
ELB improved by 0.0137592
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.347
ELB improved by 0.0128919
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.334
ELB improved by 0.0120988
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.323
ELB improved by 0.011373
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.312
ELB improved by 0.0107081
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.302
ELB improved by 0.0100988
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.293
ELB improved by 0.00954019
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-865.08
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.729
ELB improved by 301.351
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-503.574
ELB improved by 60.1558
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.214
ELB improved by 35.3592
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.251
ELB improved by 13.9635
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.189
ELB improved by 6.062
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.81
ELB improved by 4.37932
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.666
ELB improved by 4.14309
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.371
ELB improved by 4.29518
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.794
ELB improved by 4.57769
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.969
ELB improved by 4.82418
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.144
ELB improved by 4.82566
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.75
ELB improved by 4.39405
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.181
ELB improved by 3.56837
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.536
ELB improved by 2.64533
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.642
ELB improved by 1.89381
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.269
ELB improved by 1.37359
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.247
ELB improved by 1.02201
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.472
ELB improved by 0.774878
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.872
ELB improved by 0.599272
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.396
ELB improved by 0.476738
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.004
ELB improved by 0.391828
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.672
ELB improved by 0.332309
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.382
ELB improved by 0.289944
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.122
ELB improved by 0.259601
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.884
ELB improved by 0.238119
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.66
ELB improved by 0.223537
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.446
ELB improved by 0.214641
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.235
ELB improved by 0.210709
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.024
ELB improved by 0.211356
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.807
ELB improved by 0.216434
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.581
ELB improved by 0.225963
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.341
ELB improved by 0.240123
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.082
ELB improved by 0.259424
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.797
ELB improved by 0.285115
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.477
ELB improved by 0.319841
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.109
ELB improved by 0.368049
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.674
ELB improved by 0.434355
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.158
ELB improved by 0.516588
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.557
ELB improved by 0.600423
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.88
ELB improved by 0.67733
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.122
ELB improved by 0.758435
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.269
ELB improved by 0.852412
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.31
ELB improved by 0.95938
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.229
ELB improved by 1.08105
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.01
ELB improved by 1.21843
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.652
ELB improved by 1.3585
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.197
ELB improved by 1.45468
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.756
ELB improved by 1.44148
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.459
ELB improved by 1.2967
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.432
ELB improved by 1.02714
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.732
ELB improved by 0.700264
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.291
ELB improved by 0.440805
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.012
ELB improved by 0.278403
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.831
ELB improved by 0.181806
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.707
ELB improved by 0.123105
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.621
ELB improved by 0.0861318
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.559
ELB improved by 0.0620476
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.513
ELB improved by 0.0459134
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.478
ELB improved by 0.0348497
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.451
ELB improved by 0.0271076
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.43
ELB improved by 0.0215883
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.412
ELB improved by 0.0175836
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.398
ELB improved by 0.0146273
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.385
ELB improved by 0.0124078
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.374
ELB improved by 0.0107133
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.365
ELB improved by 0.00939814
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-867.419
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-554.592
ELB improved by 312.826
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-499.599
ELB improved by 54.9939
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.251
ELB improved by 31.3478
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.243
ELB improved by 12.0079
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.619
ELB improved by 5.62418
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.664
ELB improved by 3.95431
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.213
ELB improved by 3.45133
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.019
ELB improved by 3.19398
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.027
ELB improved by 2.99201
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.23
ELB improved by 2.79664
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.642
ELB improved by 2.58847
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.282
ELB improved by 2.36012
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.159
ELB improved by 2.12311
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.252
ELB improved by 1.90719
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.55
ELB improved by 1.70119
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.155
ELB improved by 1.39573
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.162
ELB improved by 0.993126
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.507
ELB improved by 0.654722
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.071
ELB improved by 0.435439
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.764
ELB improved by 0.306999
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.53
ELB improved by 0.234303
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.337
ELB improved by 0.193021
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.168
ELB improved by 0.168939
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.014
ELB improved by 0.154383
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.868
ELB improved by 0.145352
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.729
ELB improved by 0.139762
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.592
ELB improved by 0.136495
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.457
ELB improved by 0.134908
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.323
ELB improved by 0.134597
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.187
ELB improved by 0.135278
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.051
ELB improved by 0.136733
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.912
ELB improved by 0.138775
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.771
ELB improved by 0.141239
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.627
ELB improved by 0.143974
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.48
ELB improved by 0.146845
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.33
ELB improved by 0.149735
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.178
ELB improved by 0.152553
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.022
ELB improved by 0.155237
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.865
ELB improved by 0.157762
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.704
ELB improved by 0.160139
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.542
ELB improved by 0.162418
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.377
ELB improved by 0.16468
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.21
ELB improved by 0.167029
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.041
ELB improved by 0.169585
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.868
ELB improved by 0.172472
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.692
ELB improved by 0.175808
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.513
ELB improved by 0.179696
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.328
ELB improved by 0.18422
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.139
ELB improved by 0.189442
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.944
ELB improved by 0.1954
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.741
ELB improved by 0.202121
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.532
ELB improved by 0.209625
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.314
ELB improved by 0.217946
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.087
ELB improved by 0.227143
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.849
ELB improved by 0.237289
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.601
ELB improved by 0.248398
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.341
ELB improved by 0.260212
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.069
ELB improved by 0.271818
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.788
ELB improved by 0.281316
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.502
ELB improved by 0.286233
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.216
ELB improved by 0.285121
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.937
ELB improved by 0.278997
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.667
ELB improved by 0.270598
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.405
ELB improved by 0.261934
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.153
ELB improved by 0.252332
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.914
ELB improved by 0.238412
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.697
ELB improved by 0.216864
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.509
ELB improved by 0.188225
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.352
ELB improved by 0.15699
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.224
ELB improved by 0.127957
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.12
ELB improved by 0.103715
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.036
ELB improved by 0.0848367
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.965
ELB improved by 0.0709401
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.903
ELB improved by 0.0614214
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.847
ELB improved by 0.0557887
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.794
ELB improved by 0.0537533
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.738
ELB improved by 0.0551468
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.679
ELB improved by 0.0596357
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.613
ELB improved by 0.0662609
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.539
ELB improved by 0.0731828
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.461
ELB improved by 0.0783702
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.38
ELB improved by 0.0810711
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.298
ELB improved by 0.0821131
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.216
ELB improved by 0.0820569
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.136
ELB improved by 0.0795105
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.064
ELB improved by 0.0722591
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.004
ELB improved by 0.0603651
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.957
ELB improved by 0.0469045
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.922
ELB improved by 0.0351556
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.895
ELB improved by 0.0264412
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.875
ELB improved by 0.0204909
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.858
ELB improved by 0.0165234
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.844
ELB improved by 0.0138347
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.832
ELB improved by 0.0119379
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.822
ELB improved by 0.0105315
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.812
ELB improved by 0.00943744
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.692 0.241 4.510
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.070 | 0.017 | 0.120 | |
| getPIPs | 0.065 | 0.015 | 0.117 | |
| graper | 0.107 | 0.020 | 0.187 | |
| makeExampleData | 0.011 | 0.001 | 0.019 | |
| makeExampleDataWithUnequalGroups | 0.014 | 0.001 | 0.023 | |
| plotELBO | 0.274 | 0.023 | 0.460 | |
| plotGroupPenalties | 0.982 | 0.051 | 1.593 | |
| plotPosterior | 0.622 | 0.028 | 1.001 | |
| predict.graper | 2.759 | 0.183 | 4.527 | |
| print.graper | 0.064 | 0.013 | 0.118 | |