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This page was generated on 2023-10-16 11:37:11 -0400 (Mon, 16 Oct 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4626 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" | 4379 |
| merida1 | macOS 12.6.4 Monterey | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4395 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1093/2230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Keith Sheppard
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | ERROR | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 12.6.4 Monterey / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
| kjohnson2 | macOS 12.6.1 Monterey / arm64 | see weekly results here | ||||||||||||
|
To the developers/maintainers of the maanova package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/maanova.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: maanova |
| Version: 1.70.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data maanova |
| StartedAt: 2023-10-15 19:12:02 -0400 (Sun, 15 Oct 2023) |
| EndedAt: 2023-10-15 19:12:05 -0400 (Sun, 15 Oct 2023) |
| EllapsedTime: 3.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data maanova
###
##############################################################################
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* checking for file ‘maanova/DESCRIPTION’ ... OK
* preparing ‘maanova’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
-----------------------------------
* installing *source* package ‘maanova’ ...
** using staged installation
** libs
using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using SDK: ‘MacOSX11.3.sdk’
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c makeratio.c -o makeratio.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c masvd.c -o masvd.o
In file included from masvd.c:17:
./masvd.h:14:6: error: conflicting types for 'dgesvd_'
void F77_NAME(dgesvd)(const char *jobu, const char *jobvt,
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:81:24: note: expanded from macro 'F77_NAME'
#define F77_NAME(x) F77_CALL(x)
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:77:22: note: expanded from macro 'F77_CALL'
# define F77_CALL(x) x ## _
^
<scratch space>:71:1: note: expanded from here
dgesvd_
^
/Library/Frameworks/R.framework/Resources/include/R_ext/Lapack.h:348:1: note: previous declaration is here
F77_NAME(dgesvd)(const char* jobu, const char* jobvt, const int* m,
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:81:24: note: expanded from macro 'F77_NAME'
#define F77_NAME(x) F77_CALL(x)
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:77:22: note: expanded from macro 'F77_CALL'
# define F77_CALL(x) x ## _
^
<scratch space>:445:1: note: expanded from here
dgesvd_
^
masvd.c:48:24: error: too few arguments to function call, expected 16, have 14
&tmp, &lwork, &info);
^
/Library/Frameworks/R.framework/Resources/include/R_ext/Lapack.h:348:1: note: 'dgesvd_' declared here
F77_NAME(dgesvd)(const char* jobu, const char* jobvt, const int* m,
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:81:24: note: expanded from macro 'F77_NAME'
#define F77_NAME(x) F77_CALL(x)
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:77:22: note: expanded from macro 'F77_CALL'
# define F77_CALL(x) x ## _
^
<scratch space>:445:1: note: expanded from here
dgesvd_
^
masvd.c:58:24: error: too few arguments to function call, expected 16, have 14
work, &lwork, &info);
^
/Library/Frameworks/R.framework/Resources/include/R_ext/Lapack.h:348:1: note: 'dgesvd_' declared here
F77_NAME(dgesvd)(const char* jobu, const char* jobvt, const int* m,
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:81:24: note: expanded from macro 'F77_NAME'
#define F77_NAME(x) F77_CALL(x)
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:77:22: note: expanded from macro 'F77_CALL'
# define F77_CALL(x) x ## _
^
<scratch space>:445:1: note: expanded from here
dgesvd_
^
masvd.c:72:31: error: too few arguments to function call, expected 15, have 14
&tmp, &lwork, iwork, &info);
^
/Library/Frameworks/R.framework/Resources/include/R_ext/Lapack.h:2404:1: note: 'dgesdd_' declared here
F77_NAME(dgesdd)(const char* jobz,
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:81:24: note: expanded from macro 'F77_NAME'
#define F77_NAME(x) F77_CALL(x)
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:77:22: note: expanded from macro 'F77_CALL'
# define F77_CALL(x) x ## _
^
<scratch space>:76:1: note: expanded from here
dgesdd_
^
masvd.c:81:31: error: too few arguments to function call, expected 15, have 14
work, &lwork, iwork, &info);
^
/Library/Frameworks/R.framework/Resources/include/R_ext/Lapack.h:2404:1: note: 'dgesdd_' declared here
F77_NAME(dgesdd)(const char* jobz,
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:81:24: note: expanded from macro 'F77_NAME'
#define F77_NAME(x) F77_CALL(x)
^
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:77:22: note: expanded from macro 'F77_CALL'
# define F77_CALL(x) x ## _
^
<scratch space>:76:1: note: expanded from here
dgesdd_
^
masvd.c:114:2: warning: '/*' within block comment [-Wcomment]
/* work on a copy of x */
^
masvd.c:154:1: warning: '/*' within block comment [-Wcomment]
/*#ifndef IEEE_754
^
masvd.c:161:5: warning: '/*' within block comment [-Wcomment]
/* work on a copy of x */
^
masvd.c:165:2: warning: '/*' within block comment [-Wcomment]
/* ask for optimal size of work array */
^
masvd.c:189:2: warning: '/*' within block comment [-Wcomment]
/* ask for optimal size of work array */
^
5 warnings and 5 errors generated.
make: *** [masvd.o] Error 1
ERROR: compilation failed for package ‘maanova’
* removing ‘/private/tmp/RtmpbD2a3I/Rinst894c4913fcc/maanova’
-----------------------------------
ERROR: package installation failed