Back to Multiple platform build/check report for BioC 3.17:   simplified   long
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2023-10-16 11:37:15 -0400 (Mon, 16 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.2 LTS)x86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4626
palomino3Windows Server 2022 Datacenterx644.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" 4379
merida1macOS 12.6.4 Montereyx86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4395
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1231/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MIMOSA 1.38.0  (landing page)
Greg Finak
Snapshot Date: 2023-10-15 14:00:13 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/MIMOSA
git_branch: RELEASE_3_17
git_last_commit: 477a1a3
git_last_commit_date: 2023-04-25 10:30:20 -0400 (Tue, 25 Apr 2023)
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 12.6.4 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here

BUILD results for MIMOSA on merida1


To the developers/maintainers of the MIMOSA package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MIMOSA.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: MIMOSA
Version: 1.38.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MIMOSA
StartedAt: 2023-10-15 19:30:57 -0400 (Sun, 15 Oct 2023)
EndedAt: 2023-10-15 19:38:30 -0400 (Sun, 15 Oct 2023)
EllapsedTime: 452.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MIMOSA
###
##############################################################################
##############################################################################


* checking for file ‘MIMOSA/DESCRIPTION’ ... OK
* preparing ‘MIMOSA’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘MIMOSA.Rnw’ using knitr
Error: processing vignette 'MIMOSA.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'MIMOSA.tex' failed.
LaTeX errors:
! TeX capacity exceeded, sorry [main memory size=5000000].
l.53368 ## REJECTED alphau_0 121543.536214, del
                                               tall: -23.188483 newll -15484...
If you really absolutely need more capacity,
you can ask a wizard to enlarge me.
!  ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘MIMOSA.Rnw’

SUMMARY: processing the following file failed:
  ‘MIMOSA.Rnw’

Error: Vignette re-building failed.
Execution halted