Back to Build/check report for BioC 3.16 experimental data
[A]BCDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2023-04-11 14:50:26 -0400 (Tue, 11 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4502
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for AffymetrixDataTestFiles on nebbiolo2


To the developers/maintainers of the AffymetrixDataTestFiles package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 7/416HostnameOS / ArchINSTALLBUILDCHECK
AffymetrixDataTestFiles 0.36.0  (landing page)
Henrik Bengtsson
Snapshot Date: 2023-04-11 07:30:01 -0400 (Tue, 11 Apr 2023)
git_url: https://git.bioconductor.org/packages/AffymetrixDataTestFiles
git_branch: RELEASE_3_16
git_last_commit: f5b1177
git_last_commit_date: 2022-11-01 10:37:31 -0400 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: AffymetrixDataTestFiles
Version: 0.36.0
Command: /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data AffymetrixDataTestFiles
StartedAt: 2023-04-11 10:18:22 -0400 (Tue, 11 Apr 2023)
EndedAt: 2023-04-11 10:19:32 -0400 (Tue, 11 Apr 2023)
EllapsedTime: 69.9 seconds
RetCode: 0
Status:   OK  
PackageFile: AffymetrixDataTestFiles_0.36.0.tar.gz
PackageFileSize: 38.84 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data AffymetrixDataTestFiles
###
##############################################################################
##############################################################################


* checking for file ‘AffymetrixDataTestFiles/DESCRIPTION’ ... OK
* preparing ‘AffymetrixDataTestFiles’:
* checking DESCRIPTION meta-information ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘AffymetrixDataTestFiles_0.36.0.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘AffymetrixDataTestFiles/inst/annotationData/chipTypes/HuGene-1_0-st-v1/HuGene-1_0-st-v1.r4,10_probesets.pgf’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘AffymetrixDataTestFiles/inst/annotationData/chipTypes/Mapping10K_Xba131/3.ASCII/Mapping10K_Xba131.CDF’