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This page was generated on 2023-04-19 11:01:55 -0400 (Wed, 19 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 13.0 Venturaarm644.2.2 (2022-10-31) -- "Innocent and Trusting" 4256
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for GmicR on kjohnson


To the developers/maintainers of the GmicR package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 831/2183HostnameOS / ArchINSTALLBUILDBUILD BIN
GmicR 1.12.0  (landing page)
Richard Virgen-Slane
Snapshot Date: 2023-04-12 13:00:02 -0400 (Wed, 12 Apr 2023)
git_url: https://git.bioconductor.org/packages/GmicR
git_branch: RELEASE_3_16
git_last_commit: 729668d
git_last_commit_date: 2022-11-01 11:20:38 -0400 (Tue, 01 Nov 2022)
kjohnsonmacOS 13.0 Ventura / arm64  OK    ERROR  skipped

Summary

Package: GmicR
Version: 1.12.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data GmicR
StartedAt: 2023-04-17 08:35:38 -0400 (Mon, 17 Apr 2023)
EndedAt: 2023-04-17 08:36:11 -0400 (Mon, 17 Apr 2023)
EllapsedTime: 33.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data GmicR
###
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* checking for file ‘GmicR/DESCRIPTION’ ... OK
* preparing ‘GmicR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘GmicR_vignette.Rmd’ using rmarkdown
Quitting from lines 58-65 (GmicR_vignette.Rmd) 
Error: processing vignette 'GmicR_vignette.Rmd' failed with diagnostics:
cannot open the connection to 'http://xcell.ucsf.edu/iris_u133a_expr.txt'
--- failed re-building ‘GmicR_vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘GmicR_vignette.Rmd’

Error: Vignette re-building failed.
Execution halted