Back to Mac ARM64 build report for BioC 3.16
ABC[D]EFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2023-04-19 11:01:54 -0400 (Wed, 19 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 13.0 Venturaarm644.2.2 (2022-10-31) -- "Innocent and Trusting" 4256
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for DEqMS on kjohnson


To the developers/maintainers of the DEqMS package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 517/2183HostnameOS / ArchINSTALLBUILDBUILD BIN
DEqMS 1.16.0  (landing page)
Yafeng Zhu
Snapshot Date: 2023-04-12 13:00:02 -0400 (Wed, 12 Apr 2023)
git_url: https://git.bioconductor.org/packages/DEqMS
git_branch: RELEASE_3_16
git_last_commit: 26c7cd0
git_last_commit_date: 2022-11-01 11:18:24 -0400 (Tue, 01 Nov 2022)
kjohnsonmacOS 13.0 Ventura / arm64  OK    ERROR  skipped

Summary

Package: DEqMS
Version: 1.16.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data DEqMS
StartedAt: 2023-04-17 03:44:56 -0400 (Mon, 17 Apr 2023)
EndedAt: 2023-04-17 03:45:06 -0400 (Mon, 17 Apr 2023)
EllapsedTime: 9.7 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data DEqMS
###
##############################################################################
##############################################################################


* checking for file ‘DEqMS/DESCRIPTION’ ... OK
* preparing ‘DEqMS’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘DEqMS-package-vignette.Rmd’ using rmarkdown
trying URL 'https://ftp.ebi.ac.uk/pride-archive/2016/06/PXD004163/Yan_miR_Protein_table.flatprottable.txt'
Quitting from lines 64-69 (DEqMS-package-vignette.Rmd) 
Error: processing vignette 'DEqMS-package-vignette.Rmd' failed with diagnostics:
cannot open URL 'https://ftp.ebi.ac.uk/pride-archive/2016/06/PXD004163/Yan_miR_Protein_table.flatprottable.txt'
--- failed re-building ‘DEqMS-package-vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘DEqMS-package-vignette.Rmd’

Error: Vignette re-building failed.
Execution halted