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This page was generated on 2023-04-19 11:01:53 -0400 (Wed, 19 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 13.0 Venturaarm644.2.2 (2022-10-31) -- "Innocent and Trusting" 4256
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INSTALL results for ArrayExpressHTS on kjohnson


To the developers/maintainers of the ArrayExpressHTS package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 76/2183HostnameOS / ArchINSTALLBUILDBUILD BIN
ArrayExpressHTS 1.48.0  (landing page)
Angela Goncalves , Andrew Tikhonov
Snapshot Date: 2023-04-12 13:00:02 -0400 (Wed, 12 Apr 2023)
git_url: https://git.bioconductor.org/packages/ArrayExpressHTS
git_branch: RELEASE_3_16
git_last_commit: 3dbd3e8
git_last_commit_date: 2022-11-01 11:05:54 -0400 (Tue, 01 Nov 2022)
kjohnsonmacOS 13.0 Ventura / arm64  ERROR    ERROR  skipped

Summary

Package: ArrayExpressHTS
Version: 1.48.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ArrayExpressHTS
StartedAt: 2023-04-16 16:15:23 -0400 (Sun, 16 Apr 2023)
EndedAt: 2023-04-16 16:15:25 -0400 (Sun, 16 Apr 2023)
EllapsedTime: 1.5 seconds
RetCode: 1
Status:   ERROR  

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ArrayExpressHTS
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library’
* installing *source* package ‘ArrayExpressHTS’ ...
** using staged installation
** libs
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/Rhtslib/include' -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c addXS.c -o addXS.o
addXS.c:42:5: error: implicit declaration of function 'Rprintf' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
    Rprintf("What?\n");
    ^
1 error generated.
make: *** [addXS.o] Error 1
ERROR: compilation failed for package ‘ArrayExpressHTS’
* removing ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/ArrayExpressHTS’