| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:08:14 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the orthogene package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/orthogene.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1360/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| orthogene 1.1.2 (landing page) Brian Schilder
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | ERROR | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: orthogene |
| Version: 1.1.2 |
| Command: rm -rf orthogene.buildbin-libdir && mkdir orthogene.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=orthogene.buildbin-libdir orthogene_1.1.2.tar.gz |
| StartedAt: 2022-03-17 21:26:46 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 21:27:50 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 64.4 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: orthogene_1.1.2.zip |
| PackageFileSize: 2.107 MiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf orthogene.buildbin-libdir && mkdir orthogene.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=orthogene.buildbin-libdir orthogene_1.1.2.tar.gz
###
##############################################################################
##############################################################################
* installing *source* package 'orthogene' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'orthogene'
finding HTML links ... done
add_synonyms html
aggregate_mapped_genes html
aggregate_rows html
all_genes html
all_genes_babelgene html
check_gene_df_type html
convert_orthologs html
create_background html
exp_mouse html
exp_mouse_enst html
gather_images html
get_orgdb_genomeinfodbdata html
ggtree_plot html
gprofiler_orgs html
infer_species html
infer_species_plot html
invert_dictionary html
map_genes html
map_orthologs html
map_orthologs_babelgene html
map_orthologs_gprofiler html
map_orthologs_homologene html
map_species html
message_parallel html
orthogene-package html
plot_benchmark_bar html
plot_benchmark_scatter html
plot_orthotree html
prepare_tree html
report_orthologs html
run_benchmark html
taxa_id_dict html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'orthogene' as orthogene_1.1.2.zip
* DONE (orthogene)