Back to Multiple platform build/check report for BioC 3.15
ABCDEFGHIJKLMN[O]PQRSTUVWXYZ

This page was generated on 2022-03-18 11:08:13 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for ontoProc on riesling1


To the developers/maintainers of the ontoProc package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ontoProc.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1345/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ontoProc 1.17.0  (landing page)
VJ Carey
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/ontoProc
git_branch: master
git_last_commit: 3735374
git_last_commit_date: 2021-10-26 12:39:25 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    ERROR  skippedskipped
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ontoProc
Version: 1.17.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ontoProc
StartedAt: 2022-03-17 15:47:00 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 15:48:03 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 63.2 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ontoProc
###
##############################################################################
##############################################################################


* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'ontoProc' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ontoProc'
    finding HTML links ... done
    CLfeats                                 html  
    PROSYM                                  html  
    TermSet-class                           html  
    allGOterms                              html  
    bind_formal_tags                        html  
    c-TermSet-method                        html  
    cellTypeToGO                            html  
    cleanCLOnames                           html  
    common_classes                          html  
    connect_classes                         html  
    ctmarks                                 html  
    cyclicSigset                            html  
    demoApp                                 html  
    dropStop                                html  
    fastGrep                                html  
    findCommonAncestors                     html  
    finding level-2 HTML links ... done

    getCellOnto                             html  
    getLeavesFromTerm                       html  
    humrna                                  html  
    improveNodes                            html  
    ldfToTerms                              html  
    liberalMap                              html  
    makeSelectInput                         html  
    make_graphNEL_from_ontology_plot        html  
    map2prose                               html  
    mapOneNaive                             html  
    minicorpus                              html  
    nomenCheckup                            html  
    onto_plot2                              html  
    onto_roots                              html  
    packDesc2019                            html  
    recognizedPredicates                    html  
    secLevGen                               html  
    selectFromMap                           html  
    seur3kTab                               html  
    siblings_TAG                            html  
    stopWords                               html  
    subset_descendants                      html  
    sym2CellOnto                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ontoProc)
Making 'packages.html' ... done