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This page was generated on 2022-03-18 11:08:00 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for mfa on riesling1


To the developers/maintainers of the mfa package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/mfa.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1137/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mfa 1.17.0  (landing page)
Kieran Campbell
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/mfa
git_branch: master
git_last_commit: e1748c3
git_last_commit_date: 2021-10-26 12:36:01 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  ERROR    ERROR  skipped
riesling1Windows Server 2019 Standard / x64  ERROR    ERROR  skippedskipped
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: mfa
Version: 1.17.0
Command: chmod a+r mfa -R && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data mfa
StartedAt: 2022-03-17 17:20:48 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 17:20:57 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 9.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   chmod a+r mfa -R && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data mfa
###
##############################################################################
##############################################################################


* checking for file 'mfa/DESCRIPTION' ... OK
* preparing 'mfa':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package 'mfa' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c gibbs.cpp -o gibbs.o
gibbs.cpp: In function 'double log_d_norm(double, double, double)':
gibbs.cpp:13:31: error: 'PI' was not declared in this scope
   double ldn = -0.5 * log(2 * PI);
                               ^~
make: *** [D:/biocbuild/bbs-3.15-bioc/R/etc/x64/Makeconf:245: gibbs.o] Error 1
ERROR: compilation failed for package 'mfa'
* removing 'D:/biocbuild/bbs-3.15-bioc/tmpdir/RtmpYPJ6s0/Rinst317c45ab409b/mfa'
      -----------------------------------
ERROR: package installation failed