| Back to Multiple platform build/check report for BioC 3.15 |
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This page was generated on 2022-10-19 13:20:02 -0400 (Wed, 19 Oct 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4386 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" | 4138 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4205 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the brainflowprobes package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/brainflowprobes.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 217/2140 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| brainflowprobes 1.10.0 (landing page) Amanda Price
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: brainflowprobes |
| Version: 1.10.0 |
| Command: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD check --install=check:brainflowprobes.install-out.txt --library=/home/biocbuild/bbs-3.15-bioc/R/library --no-vignettes --timings brainflowprobes_1.10.0.tar.gz |
| StartedAt: 2022-10-18 18:50:26 -0400 (Tue, 18 Oct 2022) |
| EndedAt: 2022-10-18 18:58:26 -0400 (Tue, 18 Oct 2022) |
| EllapsedTime: 480.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: brainflowprobes.Rcheck |
| Warnings: 0 |
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### Running command:
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### /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD check --install=check:brainflowprobes.install-out.txt --library=/home/biocbuild/bbs-3.15-bioc/R/library --no-vignettes --timings brainflowprobes_1.10.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.15-bioc/meat/brainflowprobes.Rcheck’
* using R version 4.2.1 (2022-06-23)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘brainflowprobes/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘brainflowprobes’ version ‘1.10.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘brainflowprobes’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
plot_coverage 46.184 4.401 57.733
region_info 29.556 4.027 35.493
get_nearest_annotation 12.155 1.896 14.872
four_panels 8.954 1.088 10.622
brainflowprobes_cov 2.806 0.313 5.579
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: OK
brainflowprobes.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD INSTALL brainflowprobes ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.15-bioc/R/library’ * installing *source* package ‘brainflowprobes’ ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (brainflowprobes)
brainflowprobes.Rcheck/tests/testthat.Rout
R version 4.2.1 (2022-06-23) -- "Funny-Looking Kid"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(brainflowprobes)
>
> test_check("brainflowprobes")
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 26 ]
>
> proc.time()
user system elapsed
31.747 3.570 36.347
brainflowprobes.Rcheck/brainflowprobes-Ex.timings
| name | user | system | elapsed | |
| brainflowprobes_cov | 2.806 | 0.313 | 5.579 | |
| check_pdf | 0.382 | 0.056 | 0.438 | |
| four_panels | 8.954 | 1.088 | 10.622 | |
| four_panels_example_cov | 0.000 | 0.001 | 0.000 | |
| get_nearest_annotation | 12.155 | 1.896 | 14.872 | |
| get_region_cov | 0.001 | 0.000 | 0.000 | |
| pd | 0.001 | 0.000 | 0.000 | |
| plot_coverage | 46.184 | 4.401 | 57.733 | |
| region_info | 29.556 | 4.027 | 35.493 | |