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This page was generated on 2022-03-18 11:08:55 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for TSRchitect on riesling1


To the developers/maintainers of the TSRchitect package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TSRchitect.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2019/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TSRchitect 1.21.2  (landing page)
R. Taylor Raborn
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/TSRchitect
git_branch: master
git_last_commit: 51bc05f
git_last_commit_date: 2022-03-11 11:06:53 -0400 (Fri, 11 Mar 2022)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    ERROR  
riesling1Windows Server 2019 Standard / x64  OK    OK    ERROR    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: TSRchitect
Version: 1.21.2
Command: rm -rf TSRchitect.buildbin-libdir && mkdir TSRchitect.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=TSRchitect.buildbin-libdir TSRchitect_1.21.2.tar.gz
StartedAt: 2022-03-17 21:46:23 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:47:29 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 66.6 seconds
RetCode: 0
Status:   OK  
PackageFile: TSRchitect_1.21.2.zip
PackageFileSize: 1.21 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf TSRchitect.buildbin-libdir && mkdir TSRchitect.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=TSRchitect.buildbin-libdir TSRchitect_1.21.2.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'TSRchitect' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TSRchitect'
    finding HTML links ... done
    TSRchitectUsersGuide                    html  
    TSRmshapeIndex                          html  
    TSRshapeIndex                           html  
    addAnnotationToTSR-methods              html  
    finding level-2 HTML links ... done

    addTagCountsToTSR-methods               html  
    bedToTSS-methods                        html  
    createSummarizedExperiment-methods      html  
    detTSR-methods                          html  
    determineTSR-methods                    html  
    getBamDataFirstRead-methods             html  
    getBamDataLastRead-methods              html  
    getFileNames-methods                    html  
    getTSRdata-methods                      html  
    getTSScountData-methods                 html  
    getTSStagData-methods                   html  
    getTitle-methods                        html  
    gsq2bed-methods                         html  
    importAnnotationExternal-methods        html  
    importAnnotationHub-methods             html  
    inputToTSS-methods                      html  
    loadTSSobj-methods                      html  
    makeGRangesFromTSR-methods              html  
    mergeSampleData-methods                 html  
    prcTSS                                  html  
    processTSS-methods                      html  
    tagCountTSS                             html  
    tsrCluster                              html  
    tssArrayProperties                      html  
    tssObject                               html  
    writeTSR-methods                        html  
    writeTSS-methods                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'TSRchitect' is deprecated and will be removed from
  Bioconductor version 3.16
** testing if installed package can be loaded from final location
Warning: Package 'TSRchitect' is deprecated and will be removed from
  Bioconductor version 3.16
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'TSRchitect' as TSRchitect_1.21.2.zip
* DONE (TSRchitect)