Olivier Gevaert
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/MethylMix |
| git_branch: master |
| git_last_commit: c855dac |
| git_last_commit_date: 2021-10-26 12:15:36 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:08:00 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the MethylMix package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MethylMix.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1128/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MethylMix 2.25.0 (landing page) Olivier Gevaert
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: MethylMix |
| Version: 2.25.0 |
| Command: rm -rf MethylMix.buildbin-libdir && mkdir MethylMix.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=MethylMix.buildbin-libdir MethylMix_2.25.0.tar.gz |
| StartedAt: 2022-03-17 21:20:29 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 21:21:58 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 89.1 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: MethylMix_2.25.0.zip |
| PackageFileSize: 3.083 MiB |
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### Running command:
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### rm -rf MethylMix.buildbin-libdir && mkdir MethylMix.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=MethylMix.buildbin-libdir MethylMix_2.25.0.tar.gz
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* installing *source* package 'MethylMix' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'MethylMix'
finding HTML links ... done
BatchData html
ClusterProbes html
ComBat_NoFiles html
Download_DNAmethylation html
Download_GeneExpression html
GEcancer html
GetData html
METcancer html
METnormal html
MethylMix html
MethylMix_MixtureModel html
MethylMix_ModelGeneExpression html
MethylMix_ModelSingleGene html
MethylMix_PlotModel html
MethylMix_Predict html
MethylMix_RemoveFlipOver html
Preprocess_CancerSite_Methylation27k html
Preprocess_CancerSite_Methylation450k html
Preprocess_DNAmethylation html
Preprocess_GeneExpression html
Preprocess_MAdata_Cancer html
Preprocess_MAdata_Normal html
ProbeAnnotation html
SNPprobes html
TCGA_BatchCorrection_MolecularData html
TCGA_GENERIC_BatchCorrection html
TCGA_GENERIC_CheckBatchEffect html
TCGA_GENERIC_CleanUpSampleNames html
TCGA_GENERIC_GetSampleGroups html
TCGA_GENERIC_LoadIlluminaMethylationData
html
TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust
html
TCGA_GENERIC_MergeData html
TCGA_Load_MolecularData html
TCGA_Process_EstimateMissingValues html
betaEst_2 html
blc_2 html
combineForEachOutput html
get_firehoseData html
predictOneGene html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'MethylMix' as MethylMix_2.25.0.zip
* DONE (MethylMix)