| Back to Multiple platform build/check report for BioC 3.15 |
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This page was generated on 2022-10-19 13:23:12 -0400 (Wed, 19 Oct 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4386 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" | 4138 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4205 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the MassSpecWavelet package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MassSpecWavelet.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1081/2140 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MassSpecWavelet 1.62.0 (landing page) Sergio Oller Moreno
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: MassSpecWavelet |
| Version: 1.62.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:MassSpecWavelet.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings MassSpecWavelet_1.62.0.tar.gz |
| StartedAt: 2022-10-19 04:13:04 -0400 (Wed, 19 Oct 2022) |
| EndedAt: 2022-10-19 04:14:00 -0400 (Wed, 19 Oct 2022) |
| EllapsedTime: 55.9 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: MassSpecWavelet.Rcheck |
| Warnings: 0 |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:MassSpecWavelet.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings MassSpecWavelet_1.62.0.tar.gz
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* using log directory ‘/Users/biocbuild/bbs-3.15-bioc/meat/MassSpecWavelet.Rcheck’
* using R version 4.2.1 (2022-06-23)
* using platform: x86_64-apple-darwin17.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘MassSpecWavelet/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MassSpecWavelet’ version ‘1.62.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MassSpecWavelet’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
peakDetectionCWT 5.294 0.232 5.538
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: OK
MassSpecWavelet.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL MassSpecWavelet ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’ * installing *source* package ‘MassSpecWavelet’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MassSpecWavelet)
MassSpecWavelet.Rcheck/MassSpecWavelet-Ex.timings
| name | user | system | elapsed | |
| MassSpecWavelet.package | 2.772 | 0.281 | 3.060 | |
| cwt | 0.533 | 0.042 | 0.578 | |
| extendLength | 0.000 | 0.000 | 0.001 | |
| extendNBase | 0 | 0 | 0 | |
| getLocalMaximumCWT | 0.384 | 0.030 | 0.418 | |
| getRidge | 0.379 | 0.018 | 0.399 | |
| identifyMajorPeaks | 4.046 | 0.144 | 4.201 | |
| localMaximum | 0.069 | 0.001 | 0.071 | |
| peakDetectionCWT | 5.294 | 0.232 | 5.538 | |
| plotLocalMax | 0.276 | 0.020 | 0.296 | |
| plotPeak | 2.656 | 0.129 | 2.787 | |
| plotRidgeList | 0.450 | 0.023 | 0.475 | |
| tuneInPeakInfo | 3.750 | 0.132 | 3.893 | |