Back to Multiple platform build/check report for BioC 3.15
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2022-10-19 13:21:44 -0400 (Wed, 19 Oct 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.5 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4386
palomino3Windows Server 2022 Datacenterx644.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" 4138
merida1macOS 10.14.6 Mojavex86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4205
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for MADSEQ on palomino3


To the developers/maintainers of the MADSEQ package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MADSEQ.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1060/2140HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MADSEQ 1.22.0  (landing page)
Yu Kong
Snapshot Date: 2022-10-18 13:55:19 -0400 (Tue, 18 Oct 2022)
git_url: https://git.bioconductor.org/packages/MADSEQ
git_branch: RELEASE_3_15
git_last_commit: 25b8bbd
git_last_commit_date: 2022-04-26 11:32:46 -0400 (Tue, 26 Apr 2022)
nebbiolo1Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: MADSEQ
Version: 1.22.0
Command: chmod a+r MADSEQ -R && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data MADSEQ
StartedAt: 2022-10-18 19:18:42 -0400 (Tue, 18 Oct 2022)
EndedAt: 2022-10-18 19:20:12 -0400 (Tue, 18 Oct 2022)
EllapsedTime: 89.8 seconds
RetCode: 0
Status:   OK  
PackageFile: MADSEQ_1.22.0.tar.gz
PackageFileSize: 1.871 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r MADSEQ -R && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data MADSEQ
###
##############################################################################
##############################################################################


* checking for file 'MADSEQ/DESCRIPTION' ... OK
* preparing 'MADSEQ':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    'MADSEQ/inst/AQP7/hg19_AQP7_gr.RDS'
    'MADSEQ/inst/AQP7/hg38_AQP7_gr.RDS'
    'MADSEQ/inst/AQP7/hs37d5_AQP7_gr.RDS'
    'MADSEQ/inst/HLA/hg19_HLA_gr.RDS' 'MADSEQ/inst/HLA/hg38_HLA_gr.RDS'
    'MADSEQ/inst/HLA/hs37d5_HLA_gr.RDS' 'MADSEQ/inst/gap/hg19_gap_gr.RDS'
    'MADSEQ/inst/gap/hg38_gap_gr.RDS' 'MADSEQ/inst/gap/hs37d5_gap_gr.RDS'
* building 'MADSEQ_1.22.0.tar.gz'