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This page was generated on 2022-03-18 11:07:52 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for KnowSeq on riesling1


To the developers/maintainers of the KnowSeq package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/KnowSeq.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 988/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
KnowSeq 1.9.0  (landing page)
Daniel Castillo-Secilla
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/KnowSeq
git_branch: master
git_last_commit: db4e701
git_last_commit_date: 2021-10-26 12:52:45 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: KnowSeq
Version: 1.9.0
Command: rm -rf KnowSeq.buildbin-libdir && mkdir KnowSeq.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=KnowSeq.buildbin-libdir KnowSeq_1.9.0.tar.gz
StartedAt: 2022-03-17 21:17:11 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:18:22 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 71.8 seconds
RetCode: 0
Status:   OK  
PackageFile: KnowSeq_1.9.0.zip
PackageFileSize: 5.921 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf KnowSeq.buildbin-libdir && mkdir KnowSeq.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=KnowSeq.buildbin-libdir KnowSeq_1.9.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'KnowSeq' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'KnowSeq'
    finding HTML links ... done
    DEGsEvidences                           html  
    DEGsExtraction                          html  
    DEGsToDiseases                          html  
    DEGsToPathways                          html  
    RNAseqQA                                html  
    batchEffectRemoval                      html  
    calculateGeneExpressionValues           html  
    countsToMatrix                          html  
    dataPlot                                html  
    downloadPublicSeries                    html  
    featureSelection                        html  
    fileMove                                html  
    gdcClientDownload                       html  
    geneOntologyEnrichment                  html  
    getGenesAnnotation                      html  
    hisatAlignment                          html  
    knn_test                                html  
    knn_trn                                 html  
    knowseqReport                           html  
    plotConfMatrix                          html  
    rawAlignment                            html  
    rf_test                                 html  
    rf_trn                                  html  
    sraToFastq                              html  
    svm_test                                html  
    svm_trn                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'KnowSeq' as KnowSeq_1.9.0.zip
* DONE (KnowSeq)