| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:07:36 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the GeneTonic package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeneTonic.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 741/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GeneTonic 1.7.3 (landing page) Federico Marini
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | ERROR | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: GeneTonic |
| Version: 1.7.3 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL GeneTonic |
| StartedAt: 2022-03-17 16:00:52 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 16:01:56 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 64.6 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL GeneTonic
###
##############################################################################
##############################################################################
* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'GeneTonic' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GeneTonic'
finding HTML links ... done
GeneTonic-pkg html
GeneTonic html
GeneTonic_list html
check_colors html
checkup_GeneTonic html
checkup_gtl html
cluster_markov html
create_jaccard_matrix html
create_kappa_matrix html
describe_gtl html
deseqresult2df html
distill_enrichment html
dot-check_pandoc html
enhance_table html
enrichment_map html
enrichr_output_macrophage html
export_for_iSEE html
finding level-2 HTML links ... done
export_to_sif html
fgseaRes html
gene_plot html
geneinfo_2_html html
get_aggrscores html
get_expression_values html
ggs_backbone html
ggs_graph html
go_2_html html
gostres_macrophage html
gs_alluvial html
gs_dendro html
gs_fuzzyclustering html
gs_heatmap html
gs_horizon html
gs_mds html
gs_radar html
gs_scores html
gs_scoresheat html
gs_simplify html
gs_summary_heat html
gs_summary_overview html
gs_summary_overview_pair html
gs_volcano html
happy_hour html
map2color html
overlap_coefficient html
overlap_jaccard_index html
res_macrophage_IFNg_vs_naive html
shake_davidResult html
shake_enrichResult html
shake_enrichrResult html
shake_fgseaResult html
shake_gprofilerResult html
shake_gsenrichResult html
shake_topGOtableResult html
signature_volcano html
styleColorBar_divergent html
summarize_ggs_hubgenes html
topgoDE_macrophage_IFNg_vs_naive html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GeneTonic)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'GeomxTools' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'psygenet2r' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'systemPipeTools' is missing or broken
done