Benjamin Haibe-Kains
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/CoreGx |
| git_branch: master |
| git_last_commit: b78b5a5 |
| git_last_commit_date: 2021-10-26 12:59:39 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:07:16 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the CoreGx package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CoreGx.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 402/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CoreGx 1.7.0 (landing page) Benjamin Haibe-Kains
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: CoreGx |
| Version: 1.7.0 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL CoreGx |
| StartedAt: 2022-03-17 15:54:30 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 15:55:41 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 70.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL CoreGx
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'CoreGx' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
Creating a generic function for 'colnames' from package 'base' in package 'CoreGx'
Creating a generic function for 'rownames' from package 'base' in package 'CoreGx'
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CoreGx'
finding HTML links ... done
CoreSet-accessors html
CoreSet-class html
CoreSet-utils html
CoreSet html
CoreSet2 html
Create html
DataMapper-accessors html
DataMapper-class html
LongTable-accessors html
LongTable-class html
LongTable html
LongTableDataMapper-accessors html
REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-CoreGx/00new/CoreGx/help/assayMap+2CLongTableDataMapper+2CList-method.html
LongTableDataMapper-class html
LongTableDataMapper html
TREDataMapper-class html
TREDataMapper html
TreatmentResponseExperiment-class html
TreatmentResponseExperiment html
amcc html
as html
as.long.table html
assayCols html
buildLongTable html
callingWaterfall html
cash-LongTable-method html
cash-set-LongTable-method html
checkColumnCardinality html
checkCsetStructure html
clevelandSmall_cSet html
colIDs html
colMeta html
connectivityScore html
cosinePerm html
dot- html
dot-assayToBumpyMatrix html
dot-convertCSetMolecularProfilesToSE html
dot-distancePointLine html
dot-distancePointSegment html
dot-intersectList html
dot-longTableToSummarizedExperiment html
dot-sensitivityToLongTable html
dot-symSetDiffList html
dot-unionList html
drugSensitivitySig html
exampleDataMapper html
getIntern html
guessMapping-LongTableDataMapper-method
html
guessMapping html
gwc html
idCols-LongTable-method html
idCols html
is.items html
lapply-MultiAssayExperiment-method html
list_or_LongTable-class html
mcc html
merckLongTable html
metaConstruct html
metadata-LongTable-method html
metadata-set-LongTable-method html
reindex-LongTable-method html
reindex html
rowIDs html
rowMeta html
sensitivityInfo-set html
sensitivityInfo html
sensitivityMeasures-set html
sensitivityMeasures html
sensitivityProfiles-set html
sensitivityProfiles html
sensitivityRaw-set html
sensitivityRaw html
sensitivitySlotToLongTable html
show-CoreSet-method html
show-LongTable-method html
showSigAnnot html
sub-LongTable-ANY-ANY-ANY-method html
sub-subset-LongTable-ANY-ANY-method html
subset-LongTable-method html
subsetTo html
summarizeMolecularProfiles html
summarizeSensitivityProfiles html
updateCellId html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CoreGx)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'LiquidAssociation' is missing or broken
done