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This page was generated on 2022-03-18 11:07:13 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for CNVgears on riesling1


To the developers/maintainers of the CNVgears package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CNVgears.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 355/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CNVgears 1.3.0  (landing page)
Simone Montalbano
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/CNVgears
git_branch: master
git_last_commit: 7a78ba0
git_last_commit_date: 2021-10-26 13:05:33 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: CNVgears
Version: 1.3.0
Command: rm -rf CNVgears.buildbin-libdir && mkdir CNVgears.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=CNVgears.buildbin-libdir CNVgears_1.3.0.tar.gz
StartedAt: 2022-03-17 21:01:09 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:02:33 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 83.4 seconds
RetCode: 0
Status:   OK  
PackageFile: CNVgears_1.3.0.zip
PackageFileSize: 2.63 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf CNVgears.buildbin-libdir && mkdir CNVgears.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=CNVgears.buildbin-libdir CNVgears_1.3.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'CNVgears' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CNVgears'
    finding HTML links ... done
    CNVgears                                html  
    CNVresults_to_GRanges                   html  
    chr_uniform                             html  
    cleaning_filter                         html  
    cnmops_to_CNVresults                    html  
    cnvrs_create                            html  
    cnvs_inheritance                        html  
    cohort_examples                         html  
    genic_load                              html  
    genomic_locus                           html  
    hg18_chr_arms                           html  
    hg18_start_end_centromeres              html  
    hg19_chr_arms                           html  
    hg19_start_end_centromeres              html  
    hg38_chr_arms                           html  
    hg38_start_end_centromeres              html  
    immuno_regions                          html  
    inter_res_merge                         html  
    lrr_trio_plot                           html  
    markers_examples                        html  
    merge_calls                             html  
    penn_22                                 html  
    quanti_22                               html  
    read_NGS_intervals                      html  
    read_NGS_raw                            html  
    read_finalreport_raw                    html  
    read_finalreport_snps                   html  
    read_metadt                             html  
    read_results                            html  
    read_vcf                                html  
    summary.CNVresults                      html  
    telom_centrom                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'CNVgears' as CNVgears_1.3.0.zip
* DONE (CNVgears)