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This page was generated on 2022-03-18 11:07:11 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for CINdex on riesling1


To the developers/maintainers of the CINdex package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CINdex.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 318/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CINdex 1.23.0  (landing page)
Yuriy Gusev
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/CINdex
git_branch: master
git_last_commit: 08ce826
git_last_commit_date: 2021-10-26 12:26:47 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: CINdex
Version: 1.23.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL CINdex
StartedAt: 2022-03-17 15:37:59 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 15:39:11 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 72.1 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL CINdex
###
##############################################################################
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'CINdex' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'CINdex'
** help
*** installing help indices
  converting help for package 'CINdex'
    finding HTML links ... done
    clin.crc                                html  
    cnvgr.18.auto                           html  
    comp.heatmap                            html  
    cyto.cin4heatmap                        html  
    cytobands.cin                           html  
    extract.genes.in.cyto.regions           html  
    geneAnno                                html  
    grl.data                                html  
    hg18.ucsctrack                          html  
    run.cin.chr                             html  
    run.cin.cyto                            html  
    snpgr.18.auto                           html  
    ttest.cyto.cin.heatmap                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'CINdex'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'CINdex'
** testing if installed package keeps a record of temporary installation path
* DONE (CINdex)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'SELEX' is missing or broken
 done