VJ Carey
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/BiocOncoTK |
| git_branch: master |
| git_last_commit: d1fad8e |
| git_last_commit_date: 2022-01-14 11:42:50 -0400 (Fri, 14 Jan 2022) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:07:01 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the BiocOncoTK package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BiocOncoTK.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 161/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BiocOncoTK 1.15.1 (landing page) VJ Carey
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: BiocOncoTK |
| Version: 1.15.1 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL BiocOncoTK |
| StartedAt: 2022-03-17 16:06:21 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 16:07:34 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 72.6 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL BiocOncoTK
###
##############################################################################
##############################################################################
* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'BiocOncoTK' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'GenomicRanges::subtract' by 'magrittr::subtract' when loading 'BiocOncoTK'
** help
*** installing help indices
converting help for package 'BiocOncoTK'
finding HTML links ... done
CCLE_DRUG_BROAD html
MSIsensor.10k html
TcgaMutCounts html
TcgaNIndWithAnyMut html
add_sym html
annotTabs html
bindMSI html
bipg_tests html
brcaMAE html
buildPancanSE html
cell_70138 html
clueDemos html
clueServiceNames html
darmGBMcls html
dingMSI html
featIDMapper html
fireMSI html
get_plates html
ggFeatDens html
ggFeatureSegs html
ggMutDens html
icd10_c html
k23sig html
kang_DNArepair html
loadPatel html
log10pl1 html
map_tcga_ncit html
mc3toGR html
molpo_3utr html
molpo_5utr html
molpo_CDS html
molpo_WGS html
multiviz html
oncoPrintISB html
pancan.clin.varnames html
pancan_BQ html
finding level-2 HTML links ... done
pancan_app html
pancan_clinicalTabVarnames html
pancan_longname html
pancan_sampTypeMap html
pancan_tabulate html
patient_to_tumor_code html
pertClasses html
pert_70138 html
query_clue html
reexports html
replaceRownames html
small_msi html
tumNorSet html
utils html
viz_msi_raw html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'GenomicRanges::subtract' by 'magrittr::subtract' when loading 'BiocOncoTK'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'GenomicRanges::subtract' by 'magrittr::subtract' when loading 'BiocOncoTK'
** testing if installed package keeps a record of temporary installation path
* DONE (BiocOncoTK)
Making 'packages.html' ... done