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This page was generated on 2022-03-18 11:06:59 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for BatchQC on riesling1


To the developers/maintainers of the BatchQC package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BatchQC.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 120/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BatchQC 1.23.0  (landing page)
Solaiappan Manimaran
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/BatchQC
git_branch: master
git_last_commit: f41d5d9
git_last_commit_date: 2021-10-26 12:27:06 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: BatchQC
Version: 1.23.0
Command: rm -rf BatchQC.buildbin-libdir && mkdir BatchQC.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=BatchQC.buildbin-libdir BatchQC_1.23.0.tar.gz
StartedAt: 2022-03-17 20:54:07 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 20:55:34 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 86.8 seconds
RetCode: 0
Status:   OK  
PackageFile: BatchQC_1.23.0.zip
PackageFileSize: 1.679 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf BatchQC.buildbin-libdir && mkdir BatchQC.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=BatchQC.buildbin-libdir BatchQC_1.23.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'BatchQC' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BatchQC'
    finding HTML links ... done
    BatchQCout-class                        html  
    batchQC                                 html  
    batchQC_analyze                         html  
    batchQC_condition_adjusted              html  
    batchQC_filter_genes                    html  
    batchQC_fsva_adjusted                   html  
    batchQC_num.sv                          html  
    batchQC_shapeVariation                  html  
    batchQC_sva                             html  
    batchQC_svregress_adjusted              html  
    batchqc_circosplot                      html  
    batchqc_correlation                     html  
    batchqc_corscatter                      html  
    batchqc_explained_variation             html  
    batchqc_heatmap                         html  
    batchqc_pc_explained_variation          html  
    batchqc_pca                             html  
    batchqc_pca_svd                         html  
    batchtest                               html  
    combatPlot                              html  
    example_batchqc_data                    html  
    getShinyInput                           html  
    getShinyInputCombat                     html  
    getShinyInputOrig                       html  
    getShinyInputSVA                        html  
    getShinyInputSVAf                       html  
    getShinyInputSVAr                       html  
    gnormalize                              html  
    lmFitC                                  html  
    log2CPM                                 html  
    makeSVD                                 html  
    pcRes                                   html  
    plotPC                                  html  
    plot_genewise_moments                   html  
    plot_samplewise_moments                 html  
    protein_example_data                    html  
    rnaseq_sim                              html  
    setShinyInput                           html  
    setShinyInputCombat                     html  
    setShinyInputOrig                       html  
    setShinyInputSVA                        html  
    setShinyInputSVAf                       html  
    setShinyInputSVAr                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'BatchQC' as BatchQC_1.23.0.zip
* DONE (BatchQC)