Paul Shannon
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/trena |
| git_branch: RELEASE_3_14 |
| git_last_commit: f742819 |
| git_last_commit_date: 2021-10-26 12:35:29 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:08:57 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the trena package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/trena.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1998/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| trena 1.16.0 (landing page) Paul Shannon
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: trena |
| Version: 1.16.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:trena.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings trena_1.16.0.tar.gz |
| StartedAt: 2022-04-12 19:36:16 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 19:55:25 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 1148.8 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: trena.Rcheck |
| Warnings: 1 |
##############################################################################
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###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:trena.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings trena_1.16.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.14-bioc/meat/trena.Rcheck’
* using R version 4.1.3 (2022-03-10)
* using platform: x86_64-apple-darwin17.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘trena/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘trena’ version ‘1.16.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘trena’ can be installed ... OK
* checking installed package size ... NOTE
installed size is 5.9Mb
sub-directories of 1Mb or more:
R 2.0Mb
extdata 2.6Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking include directives in Makefiles ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘runTests.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... WARNING
Found ‘inst/doc/makefile’: should be ‘Makefile’ and will be ignored
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 1 NOTE
See
‘/Users/biocbuild/bbs-3.14-bioc/meat/trena.Rcheck/00check.log’
for details.
trena.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL trena
###
##############################################################################
##############################################################################
* installing to library ‘/Library/Frameworks/R.framework/Versions/4.1/Resources/library’
* installing *source* package ‘trena’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
See system.file("LICENSE", package="MotifDb") for use restrictions.
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
See system.file("LICENSE", package="MotifDb") for use restrictions.
** testing if installed package can be loaded from final location
See system.file("LICENSE", package="MotifDb") for use restrictions.
** testing if installed package keeps a record of temporary installation path
* DONE (trena)
trena.Rcheck/tests/runTests.Rout
R version 4.1.3 (2022-03-10) -- "One Push-Up"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin17.0 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> require(trena) || stop("unable to load trena Package")
Loading required package: trena
Loading required package: glmnet
Loading required package: Matrix
Loaded glmnet 4.1-3
Loading required package: MotifDb
Loading required package: BiocGenerics
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
tapply, union, unique, unsplit, which.max, which.min
Loading required package: S4Vectors
Loading required package: stats4
Attaching package: 'S4Vectors'
The following objects are masked from 'package:Matrix':
expand, unname
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: IRanges
Loading required package: GenomicRanges
Loading required package: GenomeInfoDb
Loading required package: Biostrings
Loading required package: XVector
Attaching package: 'Biostrings'
The following object is masked from 'package:base':
strsplit
See system.file("LICENSE", package="MotifDb") for use restrictions.
[1] TRUE
> BiocGenerics:::testPackage('trena')
[1] --- test_BayesSpikeSolverConstructor
[1] --- test_ampAD.mef2c.154tfs.278samples.bayesSpike
[1] --- test_nOrderings
[1] --- test_BayesSpikeSolverConstructor
[1] --- test_ampAD.mef2c.154tfs.278samples.bayesSpike
[1] --- test_nOrderings
[1] --- test_BicorSolverConstructor
[1] --- test_ampAD.mef2c.154tfs.278samples.bicor
[1] --- test_BicorSolverConstructor
[1] --- test_ampAD.mef2c.154tfs.278samples.bicor
[1] --- test_CandidateFilter
[1] --- test_CandidateFilter
[1] --- test_EnsembleSolverConstructor
[1] --- test_getSolverNames
[1] --- test_ampAD.mef2c.154tfs.278samples.ensemble
[1] --- test_ampAD.mef2c.154tfs.278samples.randomForestAndXGBoost
[1] --- test_selectedSolversOnly
[1] --- test_oneSolver
[1] --- test_invalidSolvers
[1] --- test_EnsembleSolverConstructor
[1] --- test_ampAD.mef2c.154tfs.278samples.ensemble
Warning in WGCNA::bicor(x = x, y = y, use = "pairwise.complete.obs") :
bicor: zero MAD in variable 'x'. Pearson correlation was used for individual columns with zero (or missing) MAD.
[1] --- test_ampAD.mef2c.154tfs.278samples.randomForestAndXGBoost
[1] --- test_getSolverNames
[1] --- test_invalidSolvers
[1] --- test_oneSolver
[1] --- test_selectedSolversOnly
Warning in WGCNA::bicor(x = x, y = y, use = "pairwise.complete.obs") :
bicor: zero MAD in variable 'x'. Pearson correlation was used for individual columns with zero (or missing) MAD.
[1] --- test_FootprintFilter.byRegion
[1] --- test_FootprintFilter.byTwoRegions
[1] --- test_FootprintFilter.byRegion
[1] --- test_FootprintFilter.byTwoRegions
Loading required package: DBI
[1] --- test_parseDatabaseUri
[1] --- test_constructor
[1] --- test_getGtfGeneBioTypes
[1] --- test_getGtfMoleculeTypes
[1] --- test_getChromLoc
[1] --- test_getGenePromoterRegion
[1] --- test_getFootprintsInRegion
[1] --- test_getFootprintsInRegionWithVariants
[1] --- test_getFootprintsForGene
[1] --- test_constructor
[1] --- test_getChromLoc
[1] --- test_getFootprintsForGene
[1] --- test_getFootprintsInRegion
[1] --- test_getFootprintsInRegionWithVariants
[1] --- test_getGenePromoterRegion
[1] --- test_getGtfGeneBioTypes
[1] --- test_getGtfMoleculeTypes
[1] --- test_parseDatabaseUri
[1] --- test_directMode
Loading required package: org.Hs.eg.db
Loading required package: AnnotationDbi
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material; view with
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")', and for packages 'citation("pkgname")'.
[1] --- test_directMode
[1] --- test_getOpenChromatinFastAndSimple
[1] --- test_getOpenChromatinFastAndSimple
[1] --- test_LassoPvSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_ampAD.mef2c.154tfs.278samples.lassopv
[1] --- test_LassoPvSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_ampAD.mef2c.154tfs.278samples.lassopv
[1] --- test_LassoSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_developAndFitDummyTestData
[1] --- test_fitDummyData
[1] --- test_ampAD.mef2c.154tfs.278samples.lasso
[1] --- test_alpha.lasso
[1] --- test_lambda.lasso
[1] --- test_keep.metrics.lasso
[1] --- test_scalePredictorPenalties.lasso
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_LassoSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_alpha.lasso
[1] --- test_ampAD.mef2c.154tfs.278samples.lasso
[1] --- test_developAndFitDummyTestData
[1] --- test_fitDummyData
[1] --- test_keep.metrics.lasso
[1] --- test_lambda.lasso
[1] --- test_scalePredictorPenalties.lasso
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_getSequence
[1] --- test_bugInStartEndOfMinusStrandHits
[1] --- test_.injectSnp
[1] --- test_.getScoredMotifs
Warning: call dbDisconnect() when finished working with a connection
[1] --- test_noMatch
[1] --- test_findMatchesByChromosomalRegion
[1] --- test_findMatchesByChromosomalRegion.twoAlternateAlleles
[1] --- test_findMatchesByChromosomalRegion.yeast
[1] --- test_findMatchesByChromosomalRegion.athaliana
[1] --- test_.getScoredMotifs
[1] --- test_.injectSnp
[1] --- test_basicConstructor
[1] --- test_bugInStartEndOfMinusStrandHits
[1] --- test_findMatchesByChromosomalRegion
[1] --- test_findMatchesByChromosomalRegion.athaliana
[1] --- test_findMatchesByChromosomalRegion.twoAlternateAlleles
[1] --- test_findMatchesByChromosomalRegion.yeast
[1] --- test_findMatchesByMultipleChromosomalRegions
[1] --- test_getSequence
[1] --- test_noMatch
[1] --- test_PearsonSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_ampAD.mef2c.154tfs.278samples.pearson
[1] --- test_PearsonSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_ampAD.mef2c.154tfs.278samples.pearson
[1] --- test_RandomForestSolverConstructor
[1] --- test_RandomForestSolverFewCandidates
[1] --- test_ampAD.mef2c.154tfs.278samples.randomForest
[1] --- test_RandomForestSolverConstructor
[1] --- test_RandomForestSolverFewCandidates
[1] --- test_ampAD.mef2c.154tfs.278samples.randomForest
[1] --- test_RidgeSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_ampAD.mef2c.154tfs.278samples.ridge
[1] --- test_alpha.ridge
[1] --- test_lambda.ridge
[1] --- test_keep.metrics.ridge
[1] --- test_RidgeSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_alpha.ridge
[1] --- test_ampAD.mef2c.154tfs.278samples.ridge
[1] --- test_keep.metrics.ridge
[1] --- test_lambda.ridge
[1] --- test_getAssayData
[1] --- test_getTarget
Warning in Solver(mtx, "gene1", c("gene2", "gene3")) :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_getRegulators
[1] --- test_eliminateSelfTFs
[1] --- test_MatrixWarnings
[1] --- test_TargetAndRegulatorWarnings
[1] --- test_MatrixWarnings
[1] --- test_TargetAndRegulatorWarnings
[1] --- test_eliminateSelfTFs
[1] --- test_getAssayData
Warning in Solver(mtx, "gene1", c("gene2", "gene3")) :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_getRegulators
[1] --- test_getTarget
[1] --- test_SpearmanSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_ampAD.mef2c.154tfs.278samples.spearman
[1] --- test_SpearmanSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
[1] --- test_ampAD.mef2c.154tfs.278samples.spearman
[1] --- test_VarianceFilter
[1] --- test_VarianceFilter
--- test_XGBoostSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
--- test_ampAD.mef2c.154tfs.278samples.XGBoost
--- test_XGBoostSolverConstructor
Warning in Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
--- test_ampAD.mef2c.154tfs.278samples.XGBoost
RUNIT TEST PROTOCOL -- Tue Apr 12 19:55:12 2022
***********************************************
Number of test functions: 79
Number of errors: 0
Number of failures: 0
1 Test Suite :
trena RUnit Tests - 79 test functions, 0 errors, 0 failures
Number of test functions: 79
Number of errors: 0
Number of failures: 0
Warning messages:
1: In Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
2: In WGCNA::bicor(x = x, y = y, use = "pairwise.complete.obs") :
bicor: zero MAD in variable 'x'. Pearson correlation was used for individual columns with zero (or missing) MAD.
3: In Solver(mtx.assay = mtx.assay, quiet = quiet, targetGene = targetGene, :
Target gene mean expression is in the bottom 10% of all genes in the assay matrix
4: In WGCNA::bicor(x = x, y = y, use = "pairwise.complete.obs") :
bicor: zero MAD in variable 'x'. Pearson correlation was used for individual columns with zero (or missing) MAD.
5: In WGCNA::bicor(x = x, y = y, use = "pairwise.complete.obs") :
bicor: zero MAD in variable 'x'. Pearson correlation was used for individual columns with zero (or missing) MAD.
6: In WGCNA::bicor(x = x, y = y, use = "pairwise.complete.obs") :
bicor: zero MAD in variable 'x'. Pearson correlation was used for individual columns with zero (or missing) MAD.
>
> proc.time()
user system elapsed
594.496 3.096 600.767
trena.Rcheck/trena-Ex.timings
| name | user | system | elapsed | |
| BayesSpikeSolver | 0.930 | 0.003 | 0.936 | |
| BicorSolver | 0.014 | 0.001 | 0.016 | |
| CandidateFilter-class | 0.001 | 0.000 | 0.001 | |
| EnsembleSolver | 0.014 | 0.000 | 0.014 | |
| FootprintFilter-class | 0 | 0 | 0 | |
| GeneOntologyFilter-class | 0.073 | 0.003 | 0.076 | |
| HumanDHSFilter-class | 0.001 | 0.001 | 0.002 | |
| LassoPVSolver | 0.014 | 0.001 | 0.014 | |
| LassoSolver | 0.015 | 0.001 | 0.016 | |
| MotifMatcher-class | 0.375 | 0.004 | 0.378 | |
| PearsonSolver | 0.016 | 0.001 | 0.017 | |
| RandomForestSolver | 0.016 | 0.002 | 0.019 | |
| RidgeSolver | 0.000 | 0.001 | 0.000 | |
| Solver-class | 0.013 | 0.002 | 0.015 | |
| SpearmanSolver | 0.014 | 0.001 | 0.016 | |
| Trena-class | 0.001 | 0.000 | 0.002 | |
| VarianceFilter-class | 0.006 | 0.001 | 0.007 | |
| XGBoostSolver | 0.016 | 0.001 | 0.016 | |
| assessSnp | 0.000 | 0.001 | 0.000 | |
| createGeneModelFromRegulatoryRegions | 0.002 | 0.001 | 0.003 | |
| createGeneModelFromTfList | 0.002 | 0.000 | 0.002 | |
| findMatchesByChromosomalRegion | 0.000 | 0.000 | 0.001 | |
| getAssayData | 0.012 | 0.001 | 0.014 | |
| getAvailableSolvers | 0 | 0 | 0 | |
| getCandidates-FootprintFilter-method | 0.000 | 0.000 | 0.001 | |
| getCandidates-GeneOntologyFilter-method | 1.142 | 0.142 | 1.284 | |
| getCandidates-HumanDHSFilter-method | 0.000 | 0.001 | 0.001 | |
| getCandidates-VarianceFilter-method | 0.016 | 0.002 | 0.017 | |
| getChromLoc | 0.017 | 0.001 | 0.018 | |
| getEncodeRegulatoryTableNames-HumanDHSFilter | 0.000 | 0.000 | 0.001 | |
| getFootprintsForGene | 0.016 | 0.002 | 0.018 | |
| getFootprintsInRegion | 0.018 | 0.002 | 0.020 | |
| getGeneModelTableColumnNames | 0.001 | 0.000 | 0.001 | |
| getGenePromoterRegion | 0.010 | 0.001 | 0.012 | |
| getGtfGeneBioTypes | 0.009 | 0.001 | 0.009 | |
| getGtfMoleculeTypes | 0.013 | 0.001 | 0.014 | |
| getPfms | 0.292 | 0.001 | 0.293 | |
| getPromoterRegionsAllGenes | 0.066 | 0.001 | 0.067 | |
| getProximalPromoter | 0 | 0 | 0 | |
| getRegulators | 0.011 | 0.001 | 0.012 | |
| getRegulatoryChromosomalRegions | 0.002 | 0.000 | 0.002 | |
| getRegulatoryRegions | 0.000 | 0.001 | 0.001 | |
| getRegulatoryTableColumnNames | 0.001 | 0.000 | 0.001 | |
| getSequence | 0.000 | 0.000 | 0.001 | |
| getSolverNames | 0.089 | 0.003 | 0.093 | |
| getTarget | 0.013 | 0.001 | 0.014 | |
| parseChromLocString | 0.001 | 0.000 | 0.001 | |
| parseDatabaseUri | 0.002 | 0.001 | 0.003 | |
| rescalePredictorWeights | 0.021 | 0.001 | 0.021 | |
| show-HumanDHSFilter-method | 0.000 | 0.000 | 0.001 | |
| show.BayesSpikeSolver | 0.021 | 0.001 | 0.022 | |
| show.BicorSolver | 0.020 | 0.001 | 0.021 | |
| show.EnsembleSolver | 0.012 | 0.001 | 0.013 | |
| show.LassoPVSolver | 0.023 | 0.001 | 0.023 | |
| show.LassoSolver | 0.013 | 0.001 | 0.014 | |
| show.MotifMatcher | 0.011 | 0.001 | 0.011 | |
| show.PearsonSolver | 0.019 | 0.002 | 0.021 | |
| show.RandomForestSolver | 0.019 | 0.000 | 0.020 | |
| show.RidgeSolver | 0.018 | 0.002 | 0.020 | |
| show.SpearmanSolver | 0.020 | 0.001 | 0.021 | |
| show.XGBoostSolver | 0.017 | 0.000 | 0.018 | |
| solve.BayesSpike | 0.000 | 0.000 | 0.001 | |
| solve.Bicor | 0.017 | 0.001 | 0.018 | |
| solve.Ensemble | 0.001 | 0.001 | 0.001 | |
| solve.Lasso | 3.226 | 0.063 | 3.415 | |
| solve.LassoPV | 0.237 | 0.032 | 0.270 | |
| solve.Pearson | 0.017 | 0.001 | 0.018 | |
| solve.RandomForest | 3.835 | 0.041 | 3.991 | |
| solve.Ridge | 4.628 | 0.022 | 4.663 | |
| solve.Spearman | 0.037 | 0.001 | 0.039 | |
| solve.XGBoost | 2.156 | 0.005 | 2.168 | |