Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:05:05 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for banocc on nebbiolo2


To the developers/maintainers of the banocc package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/banocc.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 113/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
banocc 1.18.0  (landing page)
George Weingart
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/banocc
git_branch: RELEASE_3_14
git_last_commit: 8884459
git_last_commit_date: 2021-10-26 12:34:28 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: banocc
Version: 1.18.0
Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data banocc
StartedAt: 2022-04-12 03:55:09 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 03:57:32 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 142.9 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data banocc
###
##############################################################################
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* checking for file ‘banocc/DESCRIPTION’ ... OK
* preparing ‘banocc’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘banocc-vignette.Rmd’ using rmarkdown
DIAGNOSTIC(S) FROM PARSER:
Info: integer division implicitly rounds to integer. Found int division: P * P - 1 / 2
 Positive values rounded down, negative values rounded up or down in platform-dependent way.

Could not fetch https://latex.codecogs.com/png.image?%5Cdpi%7B110%7D&space;%5Cbg_white&space;P
HttpExceptionRequest Request {
  host                 = "latex.codecogs.com"
  port                 = 443
  secure               = True
  requestHeaders       = []
  path                 = "/png.image"
  queryString          = "?%5Cdpi%7B110%7D&space;%5Cbg_white&space;P"
  method               = "GET"
  proxy                = Nothing
  rawBody              = False
  redirectCount        = 10
  responseTimeout      = ResponseTimeoutDefault
  requestVersion       = HTTP/1.1
}
 (InternalException (HandshakeFailed Error_EOF))
Error: processing vignette 'banocc-vignette.Rmd' failed with diagnostics:
pandoc document conversion failed with error 61
--- failed re-building ‘banocc-vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘banocc-vignette.Rmd’

Error: Vignette re-building failed.
Execution halted