Back to Multiple platform build/check report for BioC 3.14
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

This page was generated on 2022-04-13 12:07:29 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

CHECK results for TimiRGeN on tokay2


To the developers/maintainers of the TimiRGeN package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TimiRGeN.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1960/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TimiRGeN 1.4.0  (landing page)
Krutik Patel
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/TimiRGeN
git_branch: RELEASE_3_14
git_last_commit: ba148ba
git_last_commit_date: 2021-10-26 13:02:27 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    ERROR  
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: TimiRGeN
Version: 1.4.0
Command: C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:TimiRGeN.install-out.txt --library=C:\Users\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings TimiRGeN_1.4.0.tar.gz
StartedAt: 2022-04-13 04:05:53 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 04:20:28 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 875.4 seconds
RetCode: 1
Status:   ERROR  
CheckDir: TimiRGeN.Rcheck
Warnings: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:TimiRGeN.install-out.txt --library=C:\Users\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings TimiRGeN_1.4.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'C:/Users/biocbuild/bbs-3.14-bioc/meat/TimiRGeN.Rcheck'
* using R version 4.1.3 (2022-03-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'TimiRGeN/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'TimiRGeN' version '1.4.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'TimiRGeN' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... NOTE
  Note: found 1 marked Latin-1 string
  Note: found 2 marked UTF-8 strings
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
clusterList    15.12   0.15   19.28
multiReg       14.56   0.06   16.24
makeDynamic    13.20   0.08   14.91
makeMapp       12.64   0.07   14.37
quickDendro    11.77   0.08   13.51
quickTCPred    11.66   0.11   13.09
addIds         11.11   0.25   13.28
wikiMrna       11.17   0.17   15.00
eNames         11.08   0.14   12.80
quickDMap      11.14   0.06   12.50
quickHClust    10.95   0.11   12.75
linearRegr     10.95   0.00   13.64
quickReg       10.83   0.06   12.22
quickCrossCorr 10.79   0.06   12.50
quickPathwayTC 10.78   0.06   12.52
quickTC        10.73   0.06   12.50
diffExpressRes 10.24   0.12   13.06
getIdsMrna      9.80   0.10   12.50
** running examples for arch 'x64' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
clusterList    10.86   0.12   12.74
wikiMrna        9.29   0.12   12.06
quickDMap       9.30   0.04   10.64
quickHClust     9.15   0.14   10.72
addIds          8.64   0.20   10.46
quickTCPred     8.54   0.09    9.99
quickReg        8.57   0.05    9.91
quickTC         8.29   0.11    9.73
quickDendro     8.28   0.08    9.63
linearRegr      8.31   0.04   10.02
quickPathwayTC  8.27   0.08    9.78
multiReg        8.08   0.09    9.52
quickCrossCorr  8.06   0.05   10.11
makeDynamic     8.00   0.06    9.38
diffExpressRes  7.72   0.14    9.48
makeMapp        7.61   0.13    9.16
eNames          7.47   0.16    9.28
getIdsMrna      6.86   0.14    8.97
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'testthat.R'
 ERROR
Running the tests in 'tests/testthat.R' failed.
Last 13 lines of output:
  
  Loading required package: GenomeInfoDb
  
  > test_check(package = "TimiRGeN")
  [ FAIL 1 | WARN 49 | SKIP 0 | PASS 124 ]
  
  == Failed tests ================================================================
  -- Failure (test_quickNet.R:14:3): net should be 10 long -----------------------
  length(metadata(net)[[1]]) not equal to 10.
  1/1 mismatches
  [1] 6 - 10 == -4
  
  [ FAIL 1 | WARN 49 | SKIP 0 | PASS 124 ]
  Error: Test failures
  Execution halted
** running tests for arch 'x64' ...
  Running 'testthat.R'
 ERROR
Running the tests in 'tests/testthat.R' failed.
Last 13 lines of output:
  
  Loading required package: GenomeInfoDb
  
  > test_check(package = "TimiRGeN")
  [ FAIL 1 | WARN 49 | SKIP 0 | PASS 124 ]
  
  == Failed tests ================================================================
  -- Failure (test_quickNet.R:14:3): net should be 10 long -----------------------
  length(metadata(net)[[1]]) not equal to 10.
  1/1 mismatches
  [1] 6 - 10 == -4
  
  [ FAIL 1 | WARN 49 | SKIP 0 | PASS 124 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 ERRORs, 1 NOTE
See
  'C:/Users/biocbuild/bbs-3.14-bioc/meat/TimiRGeN.Rcheck/00check.log'
for details.

Installation output

TimiRGeN.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TimiRGeN_1.4.0.tar.gz && rm -rf TimiRGeN.buildbin-libdir && mkdir TimiRGeN.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TimiRGeN.buildbin-libdir TimiRGeN_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TimiRGeN_1.4.0.zip && rm TimiRGeN_1.4.0.tar.gz TimiRGeN_1.4.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  9 3063k    9  299k    0     0   795k      0  0:00:03 --:--:--  0:00:03  795k
 49 3063k   49 1514k    0     0  1082k      0  0:00:02  0:00:01  0:00:01 1082k
 98 3063k   98 3032k    0     0  1262k      0  0:00:02  0:00:02 --:--:-- 1262k
100 3063k  100 3063k    0     0  1274k      0  0:00:02  0:00:02 --:--:-- 1274k

install for i386

* installing *source* package 'TimiRGeN' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
Warning in load(zfile, envir = tmp_env) :
  strings not representable in native encoding will be translated to UTF-8
Warning in load(zfile, envir = tmp_env) :
  strings not representable in native encoding will be translated to UTF-8
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TimiRGeN'
    finding HTML links ... done
    UUO_data                                html  
    addIds                                  html  
    addPrefix                               html  
    clusterCheck                            html  
    clusterList                             html  
    combineGenes                            html  
    createClusters                          html  
    createClusters2                         html  
    cytoMake                                html  
    dataMiningMatrix                        html  
    diffExpressRes                          html  
    dloadGmt                                html  
    dloadMirdb                              html  
    dloadMirtarbase                         html  
    dloadTargetscan                         html  
    eNames                                  html  
    e_list_mouse                            html  
    enrichWiki                              html  
    genesList                               html  
    getIdsMir                               html  
    getIdsMrna                              html  
    gmtEnsembl                              html  
    hs_mRNA                                 html  
    hs_miR                                  html  
    hs_probes                               html  
    linearRegr                              html  
    long_data                               html  
    makeDynamic                             html  
    makeMapp                                html  
    makeNet                                 html  
    matrixFilter                            html  
    miRTarBase                              html  
    mirMrnaInt                              html  
    mm_mRNA                                 html  
    mm_miR                                  html  
    multiReg                                html  
    quickBar                                html  
    quickCrossCorr                          html  
    quickDMap                               html  
    quickDendro                             html  
    quickFuzz                               html  
    quickHClust                             html  
    quickMap                                html  
    quickNet                                html  
    quickPathwayTC                          html  
    quickReg                                html  
    quickTC                                 html  
    quickTCPred                             html  
    reduceWiki                              html  
    returnCluster                           html  
    savePlots                               html  
    significantVals                         html  
    startObject                             html  
    turnPercent                             html  
    w_list_mouse                            html  
    wikiList                                html  
    wikiMatrix                              html  
    wikiMrna                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TimiRGeN' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TimiRGeN' as TimiRGeN_1.4.0.zip
* DONE (TimiRGeN)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'TimiRGeN' successfully unpacked and MD5 sums checked

Tests output

TimiRGeN.Rcheck/tests_i386/testthat.Rout.fail


R version 4.1.3 (2022-03-10) -- "One Push-Up"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: i386-w64-mingw32/i386 (32-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> #unit test check
> library(testthat)
> library(TimiRGeN)
Loading required package: Mfuzz
Loading required package: Biobase
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which.max, which.min

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: e1071

Attaching package: 'DynDoc'

The following object is masked from 'package:BiocGenerics':

    path

Loading required package: MultiAssayExperiment
Loading required package: SummarizedExperiment
Loading required package: MatrixGenerics
Loading required package: matrixStats

Attaching package: 'matrixStats'

The following objects are masked from 'package:Biobase':

    anyMissing, rowMedians


Attaching package: 'MatrixGenerics'

The following objects are masked from 'package:matrixStats':

    colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
    colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
    colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
    colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
    colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
    colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
    colWeightedMeans, colWeightedMedians, colWeightedSds,
    colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
    rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
    rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
    rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
    rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
    rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
    rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
    rowWeightedSds, rowWeightedVars

The following object is masked from 'package:Biobase':

    rowMedians

Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following objects are masked from 'package:base':

    I, expand.grid, unname

Loading required package: IRanges

Attaching package: 'IRanges'

The following object is masked from 'package:grDevices':

    windows

Loading required package: GenomeInfoDb

> test_check(package = "TimiRGeN")
[ FAIL 1 | WARN 49 | SKIP 0 | PASS 124 ]

== Failed tests ================================================================
-- Failure (test_quickNet.R:14:3): net should be 10 long -----------------------
length(metadata(net)[[1]]) not equal to 10.
1/1 mismatches
[1] 6 - 10 == -4

[ FAIL 1 | WARN 49 | SKIP 0 | PASS 124 ]
Error: Test failures
Execution halted

TimiRGeN.Rcheck/tests_x64/testthat.Rout.fail


R version 4.1.3 (2022-03-10) -- "One Push-Up"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> #unit test check
> library(testthat)
> library(TimiRGeN)
Loading required package: Mfuzz
Loading required package: Biobase
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which.max, which.min

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: e1071

Attaching package: 'DynDoc'

The following object is masked from 'package:BiocGenerics':

    path

Loading required package: MultiAssayExperiment
Loading required package: SummarizedExperiment
Loading required package: MatrixGenerics
Loading required package: matrixStats

Attaching package: 'matrixStats'

The following objects are masked from 'package:Biobase':

    anyMissing, rowMedians


Attaching package: 'MatrixGenerics'

The following objects are masked from 'package:matrixStats':

    colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
    colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
    colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
    colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
    colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
    colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
    colWeightedMeans, colWeightedMedians, colWeightedSds,
    colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
    rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
    rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
    rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
    rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
    rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
    rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
    rowWeightedSds, rowWeightedVars

The following object is masked from 'package:Biobase':

    rowMedians

Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following objects are masked from 'package:base':

    I, expand.grid, unname

Loading required package: IRanges

Attaching package: 'IRanges'

The following object is masked from 'package:grDevices':

    windows

Loading required package: GenomeInfoDb

> test_check(package = "TimiRGeN")
[ FAIL 1 | WARN 49 | SKIP 0 | PASS 124 ]

== Failed tests ================================================================
-- Failure (test_quickNet.R:14:3): net should be 10 long -----------------------
length(metadata(net)[[1]]) not equal to 10.
1/1 mismatches
[1] 6 - 10 == -4

[ FAIL 1 | WARN 49 | SKIP 0 | PASS 124 ]
Error: Test failures
Execution halted

Example timings

TimiRGeN.Rcheck/examples_i386/TimiRGeN-Ex.timings

nameusersystemelapsed
UUO_data0.010.000.02
addIds11.11 0.2513.28
addPrefix0.580.320.89
clusterCheck0.950.141.78
clusterList15.12 0.1519.28
combineGenes0.380.020.39
createClusters0.910.001.64
createClusters21.070.001.08
cytoMake000
diffExpressRes10.24 0.1213.06
dloadGmt2.890.464.64
dloadMirdb000
dloadMirtarbase0.250.010.26
dloadTargetscan000
eNames11.08 0.1412.80
e_list_mouse0.010.000.01
enrichWiki2.190.143.31
genesList1.130.001.13
getIdsMir0.900.050.95
getIdsMrna 9.8 0.112.5
gmtEnsembl1.640.042.50
hs_mRNA0.000.020.01
hs_miR000
hs_probes0.010.000.02
linearRegr10.95 0.0013.64
long_data0.020.000.01
makeDynamic13.20 0.0814.91
makeMapp12.64 0.0714.37
makeNet0.080.000.08
matrixFilter0.330.000.33
miRTarBase000
mirMrnaInt0.280.000.28
mm_mRNA0.000.020.01
mm_miR000
multiReg14.56 0.0616.24
quickBar2.030.052.97
quickCrossCorr10.79 0.0612.50
quickDMap11.14 0.0612.50
quickDendro11.77 0.0813.51
quickFuzz1.000.021.71
quickHClust10.95 0.1112.75
quickMap0.310.000.31
quickNet0.140.000.14
quickPathwayTC10.78 0.0612.52
quickReg10.83 0.0612.22
quickTC10.73 0.0612.50
quickTCPred11.66 0.1113.09
reduceWiki0.280.000.28
returnCluster1.190.021.91
significantVals0.360.000.36
startObject0.140.020.15
turnPercent0.640.000.64
w_list_mouse0.020.000.02
wikiMatrix0.280.000.28
wikiMrna11.17 0.1715.00

TimiRGeN.Rcheck/examples_x64/TimiRGeN-Ex.timings

nameusersystemelapsed
UUO_data000
addIds 8.64 0.2010.46
addPrefix0.590.020.61
clusterCheck0.940.001.73
clusterList10.86 0.1212.74
combineGenes0.530.030.56
createClusters0.980.001.81
createClusters20.940.000.94
cytoMake000
diffExpressRes7.720.149.48
dloadGmt2.670.424.22
dloadMirdb000
dloadMirtarbase0.330.000.33
dloadTargetscan000
eNames7.470.169.28
e_list_mouse000
enrichWiki2.760.023.57
genesList0.940.010.96
getIdsMir0.810.030.85
getIdsMrna6.860.148.97
gmtEnsembl1.550.052.39
hs_mRNA000
hs_miR0.000.020.01
hs_probes000
linearRegr 8.31 0.0410.02
long_data0.000.020.01
makeDynamic8.000.069.38
makeMapp7.610.139.16
makeNet0.090.000.09
matrixFilter0.30.00.3
miRTarBase000
mirMrnaInt0.300.000.29
mm_mRNA000
mm_miR000
multiReg8.080.099.52
quickBar1.940.032.75
quickCrossCorr 8.06 0.0510.11
quickDMap 9.30 0.0410.64
quickDendro8.280.089.63
quickFuzz0.910.001.59
quickHClust 9.15 0.1410.72
quickMap0.320.000.31
quickNet0.120.000.13
quickPathwayTC8.270.089.78
quickReg8.570.059.91
quickTC8.290.119.73
quickTCPred8.540.099.99
reduceWiki0.380.000.37
returnCluster1.220.022.03
significantVals0.430.000.44
startObject0.220.030.25
turnPercent0.490.000.48
w_list_mouse0.010.000.02
wikiMatrix0.310.000.31
wikiMrna 9.29 0.1212.06