Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:07:04 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for PFP on tokay2


To the developers/maintainers of the PFP package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/PFP.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1401/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PFP 1.2.0  (landing page)
XC Zhang
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/PFP
git_branch: RELEASE_3_14
git_last_commit: 0d1251a
git_last_commit_date: 2021-10-26 13:06:03 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: PFP
Version: 1.2.0
Command: rm -rf PFP.buildbin-libdir && mkdir PFP.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PFP.buildbin-libdir PFP_1.2.0.tar.gz
StartedAt: 2022-04-13 06:48:02 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 06:48:50 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 47.9 seconds
RetCode: 0
Status:   OK  
PackageFile: PFP_1.2.0.zip
PackageFileSize: 1.373 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf PFP.buildbin-libdir && mkdir PFP.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PFP.buildbin-libdir PFP_1.2.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'PFP' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'PFP'
    finding HTML links ... done
    PFP-class                               html  
    PFP                                     html  
    PFPRefnet-class                         html  
    PFPRefnet_hsa                           html  
    PFPRefnet_mmu                           html  
    PFP_score-methods                       html  
    PFP_test1                               html  
    PFP_test2                               html  
    calc_PFP_score                          html  
    data_std                                html  
    gene_list_hsa                           html  
    genes_score-methods                     html  
    get_PFPRefnet                           html  
    get_asso_net                            html  
    get_bg_related_kegg                     html  
    get_exp_cor_edges                       html  
    get_pathway_info                        html  
    group-methods                           html  
    kegg_download                           html  
    net_info-methods                        html  
    net_names-methods                       html  
    network-methods                         html  
    pathway_info                            html  
    pathway_info_hsa                        html  
    pathways_score-methods                  html  
    plot_PFP-methods                        html  
    plot_PFPlist                            html  
    rank_PFP-methods                        html  
    refnet_info-methods                     html  
    refnet_names-methods                    html  
    result_PFP-methods                      html  
    show_PFP-methods                        html  
    show_net-methods                        html  
    stats_test-methods                      html  
    sub_PFP-methods                         html  
    subnet-methods                          html  
    trans_edges_id                          html  
    trans_graph2PFPRefnet                   html  
    finding level-2 HTML links ... done

    trans_xml2graph                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'PFP' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'PFP' as PFP_1.2.0.zip
* DONE (PFP)